STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tauBTaurine ABC transporter, ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. (268 aa)    
Predicted Functional Partners:
tauC
Taurine ABC transporter, permease protein; Identified by similarity to SP:Q47539; PMID: 16541231.
 
 0.994
tauA
Taurine ABC transporter, periplasmic taurine-binding protein; Assignment partly based on membership in taurine ABC transporter gene cluster; identified by similarity to SP:Q47537; PMID: 16541231.
 
 0.993
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    
 0.893
SPO3618
Sulfonate ABC transporter, permease protein, putative; Identified by similarity to SP:P75851; similarity to SP:Q47539; match to protein family HMM PF00528.
  
 0.871
SPO0053
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
 0.683
SPO1787
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
 0.683
SPO1786
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.565
SPO3620
Sulfonate ABC transporter, periplasmic sulfonate-binding protein.
  
  
 0.507
SPO1788
ABC transporter, periplasmic substrate-binding protein.
  
  
 0.497
SPO0050
ABC transporter, periplasmic substrate-binding protein; Assignment based partly on membership in ABC transporter gene cluster.
  
  
 0.489
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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