STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPO0714PTS system IIA component, Man family. (130 aa)    
Predicted Functional Partners:
SPO0715
Phosphocarrier protein HPr.
 
 0.998
SPO0712
Hpr serine kinase/phosphatase domain protein; Identified by similarity to SP:O34483.
 
  
 0.925
algC
Phosphomannomutase/phosphoglucomutase; Identified by similarity to SP:P26276; match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880.
    
 0.906
SPO0713
ATPase, putative; Displays ATPase and GTPase activities.
 
   
 0.903
ptsN
PTS IIA-like nitrogen-regulatory protein PtsN; Identified by match to protein family HMM PF00359; match to protein family HMM TIGR01419.
 
  
 0.855
chvG
Sensor histidine kinase ChvG.
       0.800
SPO3034
Phosphoenolpyruvate-protein phosphotransferase; Identified by similarity to SP:P37177; match to protein family HMM PF00391; match to protein family HMM PF01590; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; Belongs to the PEP-utilizing enzyme family.
  
   
 0.711
SPO0716
Hypothetical protein; Identified by similarity to PIR:D82434.
       0.674
chvI
DNA-binding response regulator ChvI; Identified by similarity to SP:P50350.
       0.577
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
       0.535
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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