Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SPO0876a | SPO0877 | SPO0876a | SPO0877 | Hypothetical protein; 'Novel gene detected by proteogenomics, SPO_PG034; similar gene identified in less than 5 other Roseobacter strains'. | Hypothetical protein; Identified by similarity to GB:AAM05262.1. | 0.437 |
| SPO0877 | SPO0876a | SPO0877 | SPO0876a | Hypothetical protein; Identified by similarity to GB:AAM05262.1. | Hypothetical protein; 'Novel gene detected by proteogenomics, SPO_PG034; similar gene identified in less than 5 other Roseobacter strains'. | 0.437 |
| SPO0877 | SPO0879 | SPO0877 | SPO0879 | Hypothetical protein; Identified by similarity to GB:AAM05262.1. | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | 0.409 |
| SPO0877 | acpP | SPO0877 | SPO2274 | Hypothetical protein; Identified by similarity to GB:AAM05262.1. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.651 |
| SPO0877 | gcvH-1 | SPO0877 | SPO0878 | Hypothetical protein; Identified by similarity to GB:AAM05262.1. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.461 |
| SPO0879 | SPO0877 | SPO0879 | SPO0877 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | Hypothetical protein; Identified by similarity to GB:AAM05262.1. | 0.409 |
| SPO0879 | gcvH-1 | SPO0879 | SPO0878 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.482 |
| acpP | SPO0877 | SPO2274 | SPO0877 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Hypothetical protein; Identified by similarity to GB:AAM05262.1. | 0.651 |
| acpP | gcvH-1 | SPO2274 | SPO0878 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.618 |
| gcvH-1 | SPO0877 | SPO0878 | SPO0877 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Hypothetical protein; Identified by similarity to GB:AAM05262.1. | 0.461 |
| gcvH-1 | SPO0879 | SPO0878 | SPO0879 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | 0.482 |
| gcvH-1 | acpP | SPO0878 | SPO2274 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.618 |