Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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SPO0929Type II DNA modification methyltransferase, putative; Possibly an isoschizomer of M.MboI found in Moraxella bovis; identified by match to protein family HMM PF05063; Belongs to the MT-A70-like family. (210 aa)    
Predicted Functional Partners:
SPO0928
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.953
ubiB
2-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.
    
   0.483
SPO3451
Modification methylase; Identified by match to protein family HMM PF01555; Belongs to the N(4)/N(6)-methyltransferase family.
     
 0.477
SPO0930
Hypothetical protein; Identified by Glimmer2; putative.
       0.448
SPO0931
Response regulator; Identified by match to protein family HMM PF00072.
       0.448
SPO1233
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.427
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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