SPO1090 protein (Ruegeria pomeroyi) - STRING interaction network

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SPO1090

DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114. (465 aa)

Predicted Functional Partners:

SPO1091

0.589

SPO1092

0.512

SPO1025

0.487

glcB

0.487

nrdR

0.420

ccrA

0.417

SPO1736

0.407

gltA

0.404

Your Current Organism:

Ruegeria pomeroyi

NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPO1025	SPO1090	SPO1025	SPO1090	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	0.487
SPO1090	SPO1025	SPO1090	SPO1025	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	0.487
SPO1090	SPO1091	SPO1090	SPO1091	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	YCII-related domain protein; Identified by similarity to GB:AAG42024.1; match to protein family HMM PF03795.	0.589
SPO1090	SPO1092	SPO1090	SPO1092	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.	0.512
SPO1090	SPO1736	SPO1090	SPO1736	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.	0.407
SPO1090	ccrA	SPO1090	SPO0370	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	crotonyl-CoA reductase; Identified by match to protein family HMM PF00107; match to protein family HMM TIGR01751.	0.417
SPO1090	glcB	SPO1090	SPO2839	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.	0.487
SPO1090	gltA	SPO1090	SPO2157	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	Citrate synthase I; Identified by similarity to SP:P00891; match to protein family HMM PF00285; match to protein family HMM TIGR01798; Belongs to the citrate synthase family.	0.404
SPO1090	nrdR	SPO1090	SPO1753	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	Riboflavin biosynthesis protein RibX; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.	0.420
SPO1091	SPO1090	SPO1091	SPO1090	YCII-related domain protein; Identified by similarity to GB:AAG42024.1; match to protein family HMM PF03795.	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	0.589
SPO1091	SPO1092	SPO1091	SPO1092	YCII-related domain protein; Identified by similarity to GB:AAG42024.1; match to protein family HMM PF03795.	Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.	0.546
SPO1092	SPO1090	SPO1092	SPO1090	Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	0.512
SPO1092	SPO1091	SPO1092	SPO1091	Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.	YCII-related domain protein; Identified by similarity to GB:AAG42024.1; match to protein family HMM PF03795.	0.546
SPO1736	SPO1090	SPO1736	SPO1090	Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	0.407
ccrA	SPO1090	SPO0370	SPO1090	crotonyl-CoA reductase; Identified by match to protein family HMM PF00107; match to protein family HMM TIGR01751.	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	0.417
glcB	SPO1090	SPO2839	SPO1090	Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	0.487
glcB	gltA	SPO2839	SPO2157	Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.	Citrate synthase I; Identified by similarity to SP:P00891; match to protein family HMM PF00285; match to protein family HMM TIGR01798; Belongs to the citrate synthase family.	0.964
gltA	SPO1090	SPO2157	SPO1090	Citrate synthase I; Identified by similarity to SP:P00891; match to protein family HMM PF00285; match to protein family HMM TIGR01798; Belongs to the citrate synthase family.	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	0.404
gltA	glcB	SPO2157	SPO2839	Citrate synthase I; Identified by similarity to SP:P00891; match to protein family HMM PF00285; match to protein family HMM TIGR01798; Belongs to the citrate synthase family.	Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.	0.964
nrdR	SPO1090	SPO1753	SPO1090	Riboflavin biosynthesis protein RibX; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.	DNA-binding protein, putative; Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.	0.420

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