Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| SPO0373 | SPO0393 | Helicase, ATP-dependent, putative. | Identified by match to protein family HMM PF01694. | 0.568 |
| SPO0373 | SPO0896 | Helicase, ATP-dependent, putative. | Hypothetical protein; Identified by similarity to GB:AAK25555.1. | 0.762 |
| SPO0373 | SPO0951 | Helicase, ATP-dependent, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.743 |
| SPO0373 | SPO1097 | Helicase, ATP-dependent, putative. | Hypothetical protein; Identified by similarity to PIR:C98286. | 0.691 |
| SPO0373 | SPO1243 | Helicase, ATP-dependent, putative. | Hypothetical protein; Identified by similarity to GB:AAR38391.1. | 0.775 |
| SPO0373 | SPO2239 | Helicase, ATP-dependent, putative. | Hypothetical protein; Identified by similarity to GB:AAN30050.1. | 0.714 |
| SPO0373 | SPO2924 | Helicase, ATP-dependent, putative. | Hypothetical protein; Identified by similarity to GB:BAC52505.1. | 0.650 |
| SPO0373 | SPO3632 | Helicase, ATP-dependent, putative. | Hypothetical protein; Identified by similarity to GB:BAC45762.1. | 0.713 |
| SPO0393 | SPO0373 | Identified by match to protein family HMM PF01694. | Helicase, ATP-dependent, putative. | 0.568 |
| SPO0393 | SPO0896 | Identified by match to protein family HMM PF01694. | Hypothetical protein; Identified by similarity to GB:AAK25555.1. | 0.740 |
| SPO0393 | SPO0951 | Identified by match to protein family HMM PF01694. | Hypothetical protein; Identified by Glimmer2; putative. | 0.765 |
| SPO0393 | SPO1097 | Identified by match to protein family HMM PF01694. | Hypothetical protein; Identified by similarity to PIR:C98286. | 0.697 |
| SPO0393 | SPO1243 | Identified by match to protein family HMM PF01694. | Hypothetical protein; Identified by similarity to GB:AAR38391.1. | 0.708 |
| SPO0393 | SPO1633 | Identified by match to protein family HMM PF01694. | Hypothetical protein; 'Novel gene detected by proteogenomics, SPO_PG030; identified in over 20 other Roseobacter strains'. | 0.753 |
| SPO0393 | SPO2239 | Identified by match to protein family HMM PF01694. | Hypothetical protein; Identified by similarity to GB:AAN30050.1. | 0.578 |
| SPO0393 | SPO2924 | Identified by match to protein family HMM PF01694. | Hypothetical protein; Identified by similarity to GB:BAC52505.1. | 0.769 |
| SPO0393 | SPO3552 | Identified by match to protein family HMM PF01694. | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266. | 0.498 |
| SPO0393 | SPO3632 | Identified by match to protein family HMM PF01694. | Hypothetical protein; Identified by similarity to GB:BAC45762.1. | 0.760 |
| SPO0896 | SPO0373 | Hypothetical protein; Identified by similarity to GB:AAK25555.1. | Helicase, ATP-dependent, putative. | 0.762 |
| SPO0896 | SPO0393 | Hypothetical protein; Identified by similarity to GB:AAK25555.1. | Identified by match to protein family HMM PF01694. | 0.740 |
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