Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SPO1240 | SPO1241 | SPO1240 | SPO1241 | Type I secretion outer membrane protein, TolC family; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01844. | Hypothetical protein; Identified by similarity to GB:AAK23300.1. | 0.739 |
| SPO1240 | pcm-1 | SPO1240 | SPO1239 | Type I secretion outer membrane protein, TolC family; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01844. | protein-L-isoaspartate O-methyltransferase; Identified by match to protein family HMM PF01135. | 0.737 |
| SPO1241 | SPO1240 | SPO1241 | SPO1240 | Hypothetical protein; Identified by similarity to GB:AAK23300.1. | Type I secretion outer membrane protein, TolC family; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01844. | 0.739 |
| SPO1241 | pcm-1 | SPO1241 | SPO1239 | Hypothetical protein; Identified by similarity to GB:AAK23300.1. | protein-L-isoaspartate O-methyltransferase; Identified by match to protein family HMM PF01135. | 0.644 |
| gltB | pcm-1 | SPO3768 | SPO1239 | Glutamate synthase, large subunit; Identified by similarity to SP:Q05755; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04897; match to protein family HMM PF04898. | protein-L-isoaspartate O-methyltransferase; Identified by match to protein family HMM PF01135. | 0.436 |
| ispE | pcm-1 | SPO0318 | SPO1239 | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | protein-L-isoaspartate O-methyltransferase; Identified by match to protein family HMM PF01135. | 0.489 |
| nuoN | pcm-1 | SPO2763 | SPO1239 | NADH dehydrogenase I, N subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. | protein-L-isoaspartate O-methyltransferase; Identified by match to protein family HMM PF01135. | 0.475 |
| pcm-1 | SPO1240 | SPO1239 | SPO1240 | protein-L-isoaspartate O-methyltransferase; Identified by match to protein family HMM PF01135. | Type I secretion outer membrane protein, TolC family; Identified by match to protein family HMM PF02321; match to protein family HMM TIGR01844. | 0.737 |
| pcm-1 | SPO1241 | SPO1239 | SPO1241 | protein-L-isoaspartate O-methyltransferase; Identified by match to protein family HMM PF01135. | Hypothetical protein; Identified by similarity to GB:AAK23300.1. | 0.644 |
| pcm-1 | gltB | SPO1239 | SPO3768 | protein-L-isoaspartate O-methyltransferase; Identified by match to protein family HMM PF01135. | Glutamate synthase, large subunit; Identified by similarity to SP:Q05755; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04897; match to protein family HMM PF04898. | 0.436 |
| pcm-1 | ispE | SPO1239 | SPO0318 | protein-L-isoaspartate O-methyltransferase; Identified by match to protein family HMM PF01135. | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.489 |
| pcm-1 | nuoN | SPO1239 | SPO2763 | protein-L-isoaspartate O-methyltransferase; Identified by match to protein family HMM PF01135. | NADH dehydrogenase I, N subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. | 0.475 |