Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SPO1257 | SPO1260 | Identified by match to protein family HMM PF02798; Belongs to the GST superfamily. | MATE efflux family protein; Identified by similarity to SP:P37340; match to protein family HMM PF01554; match to protein family HMM TIGR00797. | 0.537 |
SPO1257 | SPO1261 | Identified by match to protein family HMM PF02798; Belongs to the GST superfamily. | Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047. | 0.439 |
SPO1260 | SPO1257 | MATE efflux family protein; Identified by similarity to SP:P37340; match to protein family HMM PF01554; match to protein family HMM TIGR00797. | Identified by match to protein family HMM PF02798; Belongs to the GST superfamily. | 0.537 |
SPO1260 | SPO1261 | MATE efflux family protein; Identified by similarity to SP:P37340; match to protein family HMM PF01554; match to protein family HMM TIGR00797. | Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047. | 0.497 |
SPO1260 | SPO1262 | MATE efflux family protein; Identified by similarity to SP:P37340; match to protein family HMM PF01554; match to protein family HMM TIGR00797. | Membrane protein, putative; Identified by match to protein family HMM PF00892. | 0.489 |
SPO1261 | SPO1257 | Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047. | Identified by match to protein family HMM PF02798; Belongs to the GST superfamily. | 0.439 |
SPO1261 | SPO1260 | Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047. | MATE efflux family protein; Identified by similarity to SP:P37340; match to protein family HMM PF01554; match to protein family HMM TIGR00797. | 0.497 |
SPO1261 | SPO1262 | Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047. | Membrane protein, putative; Identified by match to protein family HMM PF00892. | 0.806 |
SPO1262 | SPO1260 | Membrane protein, putative; Identified by match to protein family HMM PF00892. | MATE efflux family protein; Identified by similarity to SP:P37340; match to protein family HMM PF01554; match to protein family HMM TIGR00797. | 0.489 |
SPO1262 | SPO1261 | Membrane protein, putative; Identified by match to protein family HMM PF00892. | Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047. | 0.806 |