STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPO1319Hypothetical protein; Identified by Glimmer2; putative. (131 aa)    
Predicted Functional Partners:
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
       0.603
SPO1317
Hypothetical protein; Identified by similarity to PIR:H81075.
       0.602
SPO3334
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.542
SPO3441
Hypothetical protein; Identified by similarity to GB:AAC02256.1.
  
     0.480
SPO1332
Hypothetical protein; Identified by similarity to GB:BAB48824.1.
  
     0.462
trgA
Tellurite resistance protein; Identified by similarity to GB:AAB95446.1.
  
     0.430
SPO2975
Membrane protein, putative; Identified by similarity to GB:BAB51018.1.
  
     0.415
SPO1230
Hypothetical protein; Identified by similarity to PIR:T31014.
  
     0.403
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.