SPO1411 protein (Ruegeria pomeroyi) - STRING interaction network

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SPO1411

C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258. (89 aa)

Predicted Functional Partners:

rpoC

0.718

SPO1412

0.648

rpoB

0.568

SPO1410

0.528

rplU

0.446

SPO0094

0.439

SPO0163

0.439

naaT

0.434

SPO2862

0.434

rpoZ

0.403

Your Current Organism:

Ruegeria pomeroyi

NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPO0094	SPO0163	SPO0094	SPO0163	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.953
SPO0094	SPO1411	SPO0094	SPO1411	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258.	0.439
SPO0094	rpoB	SPO0094	SPO3508	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.443
SPO0094	rpoC	SPO0094	SPO3507	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.501
SPO0094	rpoZ	SPO0094	SPO3204	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.431
SPO0163	SPO0094	SPO0163	SPO0094	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.953
SPO0163	SPO1411	SPO0163	SPO1411	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258.	0.439
SPO0163	rpoB	SPO0163	SPO3508	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.443
SPO0163	rpoC	SPO0163	SPO3507	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.501
SPO0163	rpoZ	SPO0163	SPO3204	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.431
SPO1410	SPO1411	SPO1410	SPO1411	Identified by match to protein family HMM PF01244.	C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258.	0.528
SPO1410	SPO1412	SPO1410	SPO1412	Identified by match to protein family HMM PF01244.	DNA modification methyltransferase domain protein.	0.436
SPO1411	SPO0094	SPO1411	SPO0094	C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258.	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.439
SPO1411	SPO0163	SPO1411	SPO0163	C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.439
SPO1411	SPO1410	SPO1411	SPO1410	C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258.	Identified by match to protein family HMM PF01244.	0.528
SPO1411	SPO1412	SPO1411	SPO1412	C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258.	DNA modification methyltransferase domain protein.	0.648
SPO1411	SPO2862	SPO1411	SPO2862	C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258.	CobW; Identified by similarity to SP:P29937; match to protein family HMM PF02492; match to protein family HMM PF07683.	0.434
SPO1411	naaT	SPO1411	SPO0657	C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258.	Metallochaperone, putative; PMID: 21757489.	0.434
SPO1411	rplU	SPO1411	SPO1990	C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.446
SPO1411	rpoB	SPO1411	SPO3508	C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.568

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