pepF protein (Ruegeria pomeroyi) - STRING interaction network

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Score

pepF

Identified by match to protein family HMM PF01432. (606 aa)

Predicted Functional Partners:

SPO1414

0.619

SPO1415

0.583

pepT

0.526

SPO2053

0.473

SPO0321

0.461

murI

0.442

SPO1417

0.408

murB

0.403

Your Current Organism:

Ruegeria pomeroyi

NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPO0321	pepF	SPO0321	SPO1413	Hypothetical protein; Identified by similarity to GB:CAD24416.1; Belongs to the methyltransferase superfamily.	Identified by match to protein family HMM PF01432.	0.461
SPO1414	SPO1415	SPO1414	SPO1415	Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.	Identified by match to protein family HMM PF02036.	0.836
SPO1414	SPO1417	SPO1414	SPO1417	Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.	Helicase, putative; Identified by match to protein family HMM PF00271.	0.538
SPO1414	pepF	SPO1414	SPO1413	Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.	Identified by match to protein family HMM PF01432.	0.619
SPO1415	SPO1414	SPO1415	SPO1414	Identified by match to protein family HMM PF02036.	Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.	0.836
SPO1415	SPO1417	SPO1415	SPO1417	Identified by match to protein family HMM PF02036.	Helicase, putative; Identified by match to protein family HMM PF00271.	0.523
SPO1415	pepF	SPO1415	SPO1413	Identified by match to protein family HMM PF02036.	Identified by match to protein family HMM PF01432.	0.583
SPO1417	SPO1414	SPO1417	SPO1414	Helicase, putative; Identified by match to protein family HMM PF00271.	Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.	0.538
SPO1417	SPO1415	SPO1417	SPO1415	Helicase, putative; Identified by match to protein family HMM PF00271.	Identified by match to protein family HMM PF02036.	0.523
SPO1417	pepF	SPO1417	SPO1413	Helicase, putative; Identified by match to protein family HMM PF00271.	Identified by match to protein family HMM PF01432.	0.408
SPO2053	pepF	SPO2053	SPO1413	Thermostable carboxypeptidase; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.	Identified by match to protein family HMM PF01432.	0.473
murB	murI	SPO1200	SPO1875	UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	0.451
murB	pepF	SPO1200	SPO1413	UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.	Identified by match to protein family HMM PF01432.	0.403
murI	murB	SPO1875	SPO1200	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.	0.451
murI	pepF	SPO1875	SPO1413	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	Identified by match to protein family HMM PF01432.	0.442
pepF	SPO0321	SPO1413	SPO0321	Identified by match to protein family HMM PF01432.	Hypothetical protein; Identified by similarity to GB:CAD24416.1; Belongs to the methyltransferase superfamily.	0.461
pepF	SPO1414	SPO1413	SPO1414	Identified by match to protein family HMM PF01432.	Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.	0.619
pepF	SPO1415	SPO1413	SPO1415	Identified by match to protein family HMM PF01432.	Identified by match to protein family HMM PF02036.	0.583
pepF	SPO1417	SPO1413	SPO1417	Identified by match to protein family HMM PF01432.	Helicase, putative; Identified by match to protein family HMM PF00271.	0.408
pepF	SPO2053	SPO1413	SPO2053	Identified by match to protein family HMM PF01432.	Thermostable carboxypeptidase; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.	0.473

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