SPO1558 protein (Ruegeria pomeroyi) - STRING interaction network

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SPO1558

Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01803. (101 aa)

Predicted Functional Partners:

SPO1379

0.721

SPO1942

0.717

fhs-1

0.619

folD1

0.607

folD

0.607

rpmC

0.593

SPO3539

0.589

rplV

0.569

rpsC

0.559

SPO1555

0.555

Your Current Organism:

Ruegeria pomeroyi

NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPO1379	SPO1558	SPO1379	SPO1558	Prephenate dehydrogenase, putative; Identified by match to protein family HMM PF02153.	Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01803.	0.721
SPO1379	SPO3539	SPO1379	SPO3539	Prephenate dehydrogenase, putative; Identified by match to protein family HMM PF02153.	Prephenate dehydratase; Identified by similarity to PIR:AC3490; match to protein family HMM PF00800.	0.578
SPO1555	SPO1558	SPO1555	SPO1558	Formate dehydrogenase, beta subunit; Identified by similarity to GB:AAN03798.1; match to protein family HMM PF01257; match to protein family HMM PF01512.	Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01803.	0.555
SPO1555	fhs-1	SPO1555	SPO1557	Formate dehydrogenase, beta subunit; Identified by similarity to GB:AAN03798.1; match to protein family HMM PF01257; match to protein family HMM PF01512.	Formate--tetrahydrofolate ligase; Identified by similarity to SP:Q59925; match to protein family HMM PF01268; Belongs to the formate--tetrahydrofolate ligase family.	0.704
SPO1555	folD	SPO1555	SPO1560	Formate dehydrogenase, beta subunit; Identified by similarity to GB:AAN03798.1; match to protein family HMM PF01257; match to protein family HMM PF01512.	folD bifunctional protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.	0.489
SPO1555	folD1	SPO1555	SPO1559	Formate dehydrogenase, beta subunit; Identified by similarity to GB:AAN03798.1; match to protein family HMM PF01257; match to protein family HMM PF01512.	folD bifunctional protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.	0.489
SPO1558	SPO1379	SPO1558	SPO1379	Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01803.	Prephenate dehydrogenase, putative; Identified by match to protein family HMM PF02153.	0.721
SPO1558	SPO1555	SPO1558	SPO1555	Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01803.	Formate dehydrogenase, beta subunit; Identified by similarity to GB:AAN03798.1; match to protein family HMM PF01257; match to protein family HMM PF01512.	0.555
SPO1558	SPO1942	SPO1558	SPO1942	Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01803.	3-deoxy-7-phosphoheptulonate synthase; Identified by match to protein family HMM PF01474; match to protein family HMM TIGR01358.	0.717
SPO1558	SPO3539	SPO1558	SPO3539	Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01803.	Prephenate dehydratase; Identified by similarity to PIR:AC3490; match to protein family HMM PF00800.	0.589
SPO1558	fhs-1	SPO1558	SPO1557	Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01803.	Formate--tetrahydrofolate ligase; Identified by similarity to SP:Q59925; match to protein family HMM PF01268; Belongs to the formate--tetrahydrofolate ligase family.	0.619
SPO1558	folD	SPO1558	SPO1560	Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01803.	folD bifunctional protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.	0.607
SPO1558	folD1	SPO1558	SPO1559	Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01803.	folD bifunctional protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.	0.607
SPO1558	rplV	SPO1558	SPO0486	Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01803.	Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity).	0.569
SPO1558	rpmC	SPO1558	SPO0493	Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01803.	Ribosomal protein L29; Identified by similarity to SP:P04457; Belongs to the universal ribosomal protein uL29 family.	0.593
SPO1558	rpsC	SPO1558	SPO0487	Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01803.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.559
SPO1942	SPO1558	SPO1942	SPO1558	3-deoxy-7-phosphoheptulonate synthase; Identified by match to protein family HMM PF01474; match to protein family HMM TIGR01358.	Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01803.	0.717
SPO3539	SPO1379	SPO3539	SPO1379	Prephenate dehydratase; Identified by similarity to PIR:AC3490; match to protein family HMM PF00800.	Prephenate dehydrogenase, putative; Identified by match to protein family HMM PF02153.	0.578
SPO3539	SPO1558	SPO3539	SPO1558	Prephenate dehydratase; Identified by similarity to PIR:AC3490; match to protein family HMM PF00800.	Identified by match to protein family HMM PF01817; match to protein family HMM TIGR01803.	0.589
fhs-1	SPO1555	SPO1557	SPO1555	Formate--tetrahydrofolate ligase; Identified by similarity to SP:Q59925; match to protein family HMM PF01268; Belongs to the formate--tetrahydrofolate ligase family.	Formate dehydrogenase, beta subunit; Identified by similarity to GB:AAN03798.1; match to protein family HMM PF01257; match to protein family HMM PF01512.	0.704

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