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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnTGlutamine synthetase III; Identified by similarity to SP:P31592; match to protein family HMM PF00120; match to protein family HMM PF03951; Belongs to the glutamine synthetase family. (442 aa)    
Predicted Functional Partners:
SPO1575
Identified by match to protein family HMM PF01493.
 
  
 0.914
SPO1576
Glutamine amidotransferase, class II; Identified by match to protein family HMM PF00310.
 
  
 0.913
SPO1574
Identified by match to protein family HMM PF01645; Belongs to the glutamate synthase family.
 
  
 0.910
gltB
Glutamate synthase, large subunit; Identified by similarity to SP:Q05755; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04897; match to protein family HMM PF04898.
  
 
 0.839
SPO1582
Hypothetical protein; Identified by similarity to GB:BAB53455.1.
 
   
 0.760
SPO1580
Hypothetical protein; Identified by similarity to GB:BAB53453.1.
 
   
 0.742
SPO1583
DNA-binding protein, putative; Identified by match to protein family HMM PF01381.
 
  
 0.742
SPO1579
Identified by match to protein family HMM PF01571; Belongs to the GcvT family.
 
   
 0.725
SPO1581
Oxidoreductase NAD-binding domain/2Fe-2S iron-sulfur cluster binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175.
 
  
 0.689
SPO1562
Glycine cleavage system T protein, putative; Identified by match to protein family HMM PF01571; Belongs to the GcvT family.
 
   
 0.671
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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