Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SPO0339 | SPO2451 | SPO0339 | SPO2451 | Identified by match to protein family HMM PF01553. | Acyltransferase, putative; Identified by match to protein family HMM PF01553. | 0.907 |
| SPO0339 | cdsA | SPO0339 | SPO1666 | Identified by match to protein family HMM PF01553. | Phosphatidate cytidylyltransferase; Identified by similarity to SP:P06466; match to protein family HMM PF01148; Belongs to the CDS family. | 0.920 |
| SPO1668 | bamA | SPO1668 | SPO1670 | Membrane-associated zinc metalloprotease, putative; Identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054. | Outer membrane protein, OMP85 family; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.963 |
| SPO1668 | cdsA | SPO1668 | SPO1666 | Membrane-associated zinc metalloprotease, putative; Identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054. | Phosphatidate cytidylyltransferase; Identified by similarity to SP:P06466; match to protein family HMM PF01148; Belongs to the CDS family. | 0.937 |
| SPO1668 | dxr | SPO1668 | SPO1667 | Membrane-associated zinc metalloprotease, putative; Identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.942 |
| SPO1668 | frr | SPO1668 | SPO1664 | Membrane-associated zinc metalloprotease, putative; Identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.907 |
| SPO1668 | pyrH | SPO1668 | SPO1662 | Membrane-associated zinc metalloprotease, putative; Identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.763 |
| SPO1668 | uppS | SPO1668 | SPO1665 | Membrane-associated zinc metalloprotease, putative; Identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.976 |
| SPO2451 | SPO0339 | SPO2451 | SPO0339 | Acyltransferase, putative; Identified by match to protein family HMM PF01553. | Identified by match to protein family HMM PF01553. | 0.907 |
| SPO2451 | cdsA | SPO2451 | SPO1666 | Acyltransferase, putative; Identified by match to protein family HMM PF01553. | Phosphatidate cytidylyltransferase; Identified by similarity to SP:P06466; match to protein family HMM PF01148; Belongs to the CDS family. | 0.917 |
| SPO2451 | pgsA | SPO2451 | SPO3635 | Acyltransferase, putative; Identified by match to protein family HMM PF01553. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.411 |
| bamA | SPO1668 | SPO1670 | SPO1668 | Outer membrane protein, OMP85 family; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Membrane-associated zinc metalloprotease, putative; Identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054. | 0.963 |
| bamA | cdsA | SPO1670 | SPO1666 | Outer membrane protein, OMP85 family; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Phosphatidate cytidylyltransferase; Identified by similarity to SP:P06466; match to protein family HMM PF01148; Belongs to the CDS family. | 0.670 |
| bamA | dxr | SPO1670 | SPO1667 | Outer membrane protein, OMP85 family; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.682 |
| bamA | frr | SPO1670 | SPO1664 | Outer membrane protein, OMP85 family; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.777 |
| bamA | pyrH | SPO1670 | SPO1662 | Outer membrane protein, OMP85 family; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.786 |
| bamA | uppS | SPO1670 | SPO1665 | Outer membrane protein, OMP85 family; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.680 |
| cdsA | SPO0339 | SPO1666 | SPO0339 | Phosphatidate cytidylyltransferase; Identified by similarity to SP:P06466; match to protein family HMM PF01148; Belongs to the CDS family. | Identified by match to protein family HMM PF01553. | 0.920 |
| cdsA | SPO1668 | SPO1666 | SPO1668 | Phosphatidate cytidylyltransferase; Identified by similarity to SP:P06466; match to protein family HMM PF01148; Belongs to the CDS family. | Membrane-associated zinc metalloprotease, putative; Identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054. | 0.937 |
| cdsA | SPO2451 | SPO1666 | SPO2451 | Phosphatidate cytidylyltransferase; Identified by similarity to SP:P06466; match to protein family HMM PF01148; Belongs to the CDS family. | Acyltransferase, putative; Identified by match to protein family HMM PF01553. | 0.917 |
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