Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| SPO1794 | SPO1796 | Formate dehydrogenase, gamma subunit; Identified by match to protein family HMM TIGR01583. | Formate dehydrogenase, alpha subunit, putative; Identified by similarity to PIR:S18213; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.997 |
| SPO1794 | SPO1797 | Formate dehydrogenase, gamma subunit; Identified by match to protein family HMM TIGR01583. | Twin-arginine translocation pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409. | 0.886 |
| SPO1794 | SPO1798 | Formate dehydrogenase, gamma subunit; Identified by match to protein family HMM TIGR01583. | Chaperone, TorD family; Identified by match to protein family HMM PF06192. | 0.898 |
| SPO1794 | SPO1799 | Formate dehydrogenase, gamma subunit; Identified by match to protein family HMM TIGR01583. | Hypothetical protein; Identified by Glimmer2; putative. | 0.855 |
| SPO1794 | SPO1800 | Formate dehydrogenase, gamma subunit; Identified by match to protein family HMM TIGR01583. | Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037. | 0.808 |
| SPO1794 | SPO1801 | Formate dehydrogenase, gamma subunit; Identified by match to protein family HMM TIGR01583. | Hypothetical protein; Identified by similarity to SP:P24059. | 0.764 |
| SPO1794 | SPO1802 | Formate dehydrogenase, gamma subunit; Identified by match to protein family HMM TIGR01583. | Hypothetical protein; Identified by similarity to PIR:H95364. | 0.808 |
| SPO1794 | SPO1804 | Formate dehydrogenase, gamma subunit; Identified by match to protein family HMM TIGR01583. | Hypothetical protein; Identified by similarity to GB:BAC50748.1. | 0.810 |
| SPO1794 | SPO1805 | Formate dehydrogenase, gamma subunit; Identified by match to protein family HMM TIGR01583. | Hypothetical protein; Identified by Glimmer2; putative. | 0.791 |
| SPO1796 | SPO1794 | Formate dehydrogenase, alpha subunit, putative; Identified by similarity to PIR:S18213; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Formate dehydrogenase, gamma subunit; Identified by match to protein family HMM TIGR01583. | 0.997 |
| SPO1796 | SPO1797 | Formate dehydrogenase, alpha subunit, putative; Identified by similarity to PIR:S18213; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Twin-arginine translocation pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409. | 0.851 |
| SPO1796 | SPO1798 | Formate dehydrogenase, alpha subunit, putative; Identified by similarity to PIR:S18213; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Chaperone, TorD family; Identified by match to protein family HMM PF06192. | 0.906 |
| SPO1796 | SPO1799 | Formate dehydrogenase, alpha subunit, putative; Identified by similarity to PIR:S18213; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.863 |
| SPO1796 | SPO1800 | Formate dehydrogenase, alpha subunit, putative; Identified by similarity to PIR:S18213; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037. | 0.843 |
| SPO1796 | SPO1801 | Formate dehydrogenase, alpha subunit, putative; Identified by similarity to PIR:S18213; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein; Identified by similarity to SP:P24059. | 0.569 |
| SPO1796 | SPO1802 | Formate dehydrogenase, alpha subunit, putative; Identified by similarity to PIR:S18213; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein; Identified by similarity to PIR:H95364. | 0.635 |
| SPO1796 | SPO1804 | Formate dehydrogenase, alpha subunit, putative; Identified by similarity to PIR:S18213; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein; Identified by similarity to GB:BAC50748.1. | 0.756 |
| SPO1796 | SPO1805 | Formate dehydrogenase, alpha subunit, putative; Identified by similarity to PIR:S18213; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.768 |
| SPO1797 | SPO1794 | Twin-arginine translocation pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409. | Formate dehydrogenase, gamma subunit; Identified by match to protein family HMM TIGR01583. | 0.886 |
| SPO1797 | SPO1796 | Twin-arginine translocation pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409. | Formate dehydrogenase, alpha subunit, putative; Identified by similarity to PIR:S18213; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.851 |
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