Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SPO0642 | SPO1586 | SPO0642 | SPO1586 | Oxidoreductase, FAD-binding protein. | Sarcosine oxidase, alpha subunit family; Identified by similarity to SP:Q46337; match to protein family HMM PF01571; match to protein family HMM TIGR01372; Belongs to the GcvT family. | 0.717 |
| SPO0642 | SPO2001 | SPO0642 | SPO2001 | Oxidoreductase, FAD-binding protein. | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266. | 0.905 |
| SPO0642 | SPO3604 | SPO0642 | SPO3604 | Oxidoreductase, FAD-binding protein. | D-amino acid aminotransferase, putative; Identified by similarity to PIR:A31422; match to protein family HMM PF01063. | 0.916 |
| SPO1586 | SPO0642 | SPO1586 | SPO0642 | Sarcosine oxidase, alpha subunit family; Identified by similarity to SP:Q46337; match to protein family HMM PF01571; match to protein family HMM TIGR01372; Belongs to the GcvT family. | Oxidoreductase, FAD-binding protein. | 0.717 |
| SPO1586 | SPO2001 | SPO1586 | SPO2001 | Sarcosine oxidase, alpha subunit family; Identified by similarity to SP:Q46337; match to protein family HMM PF01571; match to protein family HMM TIGR01372; Belongs to the GcvT family. | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266. | 0.717 |
| SPO2000 | SPO2001 | SPO2000 | SPO2001 | Identified by match to protein family HMM PF01042. | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266. | 0.758 |
| SPO2000 | SPO2002 | SPO2000 | SPO2002 | Identified by match to protein family HMM PF01042. | Acetylpolyamine aminohydrolase; Identified by similarity to SP:Q48935; match to protein family HMM PF00850. | 0.750 |
| SPO2000 | SPO2003 | SPO2000 | SPO2003 | Identified by match to protein family HMM PF01042. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.753 |
| SPO2000 | SPO2004 | SPO2000 | SPO2004 | Identified by match to protein family HMM PF01042. | Hypothetical protein; Identified by similarity to GB:BAB47761.1; match to protein family HMM PF05853. | 0.741 |
| SPO2000 | SPO2005 | SPO2000 | SPO2005 | Identified by match to protein family HMM PF01042. | Aminotransferase, class III; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.760 |
| SPO2000 | SPO2007 | SPO2000 | SPO2007 | Identified by match to protein family HMM PF01042. | Spermidine/putrescine ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | 0.586 |
| SPO2000 | potA-2 | SPO2000 | SPO2006 | Identified by match to protein family HMM PF01042. | Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.742 |
| SPO2001 | SPO0642 | SPO2001 | SPO0642 | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266. | Oxidoreductase, FAD-binding protein. | 0.905 |
| SPO2001 | SPO1586 | SPO2001 | SPO1586 | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266. | Sarcosine oxidase, alpha subunit family; Identified by similarity to SP:Q46337; match to protein family HMM PF01571; match to protein family HMM TIGR01372; Belongs to the GcvT family. | 0.717 |
| SPO2001 | SPO2000 | SPO2001 | SPO2000 | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266. | Identified by match to protein family HMM PF01042. | 0.758 |
| SPO2001 | SPO2002 | SPO2001 | SPO2002 | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266. | Acetylpolyamine aminohydrolase; Identified by similarity to SP:Q48935; match to protein family HMM PF00850. | 0.844 |
| SPO2001 | SPO2003 | SPO2001 | SPO2003 | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.814 |
| SPO2001 | SPO2004 | SPO2001 | SPO2004 | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266. | Hypothetical protein; Identified by similarity to GB:BAB47761.1; match to protein family HMM PF05853. | 0.773 |
| SPO2001 | SPO2005 | SPO2001 | SPO2005 | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266. | Aminotransferase, class III; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.776 |
| SPO2001 | SPO2007 | SPO2001 | SPO2007 | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266. | Spermidine/putrescine ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | 0.745 |
page 1 of 4