SPO2124 protein (Ruegeria pomeroyi) - STRING interaction network

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SPO2124

RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family. (200 aa)

Predicted Functional Partners:

xth

0.706

SPO3425

0.706

scpB

0.609

SPO2924

0.540

pheT

0.495

SPO2123

0.494

SPO1069

0.478

engA

0.478

rluD

0.421

SPO2520

0.400

Your Current Organism:

Ruegeria pomeroyi

NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPO1069	SPO2124	SPO1069	SPO2124	Hypothetical protein; Identified by Glimmer2; putative.	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	0.478
SPO1069	pheT	SPO1069	SPO3489	Hypothetical protein; Identified by Glimmer2; putative.	phenylalanyl-tRNA synthetase, beta subunit; Identified by similarity to SP:P07395; match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.	0.469
SPO1069	scpB	SPO1069	SPO2500	Hypothetical protein; Identified by Glimmer2; putative.	Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.529
SPO2123	SPO2124	SPO2123	SPO2124	Identified by match to protein family HMM PF01844.	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	0.494
SPO2123	scpB	SPO2123	SPO2500	Identified by match to protein family HMM PF01844.	Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.539
SPO2124	SPO1069	SPO2124	SPO1069	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Hypothetical protein; Identified by Glimmer2; putative.	0.478
SPO2124	SPO2123	SPO2124	SPO2123	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Identified by match to protein family HMM PF01844.	0.494
SPO2124	SPO2520	SPO2124	SPO2520	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Hypothetical protein; Identified by similarity to PIR:D83601.	0.400
SPO2124	SPO2924	SPO2124	SPO2924	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Hypothetical protein; Identified by similarity to GB:BAC52505.1.	0.540
SPO2124	SPO3425	SPO2124	SPO3425	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Exodeoxyribonuclease III, putative; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00633.	0.706
SPO2124	engA	SPO2124	SPO2328	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.478
SPO2124	pheT	SPO2124	SPO3489	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	phenylalanyl-tRNA synthetase, beta subunit; Identified by similarity to SP:P07395; match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.	0.495
SPO2124	rluD	SPO2124	SPO1408	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	0.421
SPO2124	scpB	SPO2124	SPO2500	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.609
SPO2124	xth	SPO2124	SPO2509	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Exodeoxyribonuclease III; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.	0.706
SPO2520	SPO2124	SPO2520	SPO2124	Hypothetical protein; Identified by similarity to PIR:D83601.	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	0.400
SPO2924	SPO2124	SPO2924	SPO2124	Hypothetical protein; Identified by similarity to GB:BAC52505.1.	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	0.540
SPO3425	SPO2124	SPO3425	SPO2124	Exodeoxyribonuclease III, putative; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00633.	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	0.706
SPO3425	xth	SPO3425	SPO2509	Exodeoxyribonuclease III, putative; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00633.	Exodeoxyribonuclease III; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.	0.924
engA	SPO2124	SPO2328	SPO2124	GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	RNA pseudouridylate synthase; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	0.478

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