Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SPO0276 | SPO2287 | SPO0276 | SPO2287 | Transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00196. | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | 0.445 |
| SPO1388 | SPO2287 | SPO1388 | SPO2287 | Transcriptional regulator, LuxR family/hydrolase, alpha/beta fold family; Identified by similarity to GB:BAC51348.1; match to protein family HMM PF00196; match to protein family HMM PF00561. | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | 0.479 |
| SPO1610 | SPO2287 | SPO1610 | SPO2287 | Transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00196. | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | 0.445 |
| SPO1866 | SPO2287 | SPO1866 | SPO2287 | Hypothetical protein; Identified by Glimmer2; putative. | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | 0.483 |
| SPO1866 | SPO2341 | SPO1866 | SPO2341 | Hypothetical protein; Identified by Glimmer2; putative. | Methyltransferase, FkbM family; Identified by match to protein family HMM TIGR01444. | 0.511 |
| SPO1866 | luxR-2 | SPO1866 | SPO2286 | Hypothetical protein; Identified by Glimmer2; putative. | Autoinducer-binding transcriptional regulator LuxR; Identified by match to protein family HMM PF00196; match to protein family HMM PF03472. | 0.520 |
| SPO1974 | SPO2287 | SPO1974 | SPO2287 | Autoinducer-binding transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00196; match to protein family HMM PF03472. | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | 0.723 |
| SPO2285 | SPO2287 | SPO2285 | SPO2287 | DNA-binding protein, putative; Identified by match to protein family HMM PF01381. | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | 0.439 |
| SPO2285 | luxR-2 | SPO2285 | SPO2286 | DNA-binding protein, putative; Identified by match to protein family HMM PF01381. | Autoinducer-binding transcriptional regulator LuxR; Identified by match to protein family HMM PF00196; match to protein family HMM PF03472. | 0.674 |
| SPO2287 | SPO0276 | SPO2287 | SPO0276 | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | Transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00196. | 0.445 |
| SPO2287 | SPO1388 | SPO2287 | SPO1388 | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | Transcriptional regulator, LuxR family/hydrolase, alpha/beta fold family; Identified by similarity to GB:BAC51348.1; match to protein family HMM PF00196; match to protein family HMM PF00561. | 0.479 |
| SPO2287 | SPO1610 | SPO2287 | SPO1610 | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | Transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00196. | 0.445 |
| SPO2287 | SPO1866 | SPO2287 | SPO1866 | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | Hypothetical protein; Identified by Glimmer2; putative. | 0.483 |
| SPO2287 | SPO1974 | SPO2287 | SPO1974 | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | Autoinducer-binding transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00196; match to protein family HMM PF03472. | 0.723 |
| SPO2287 | SPO2285 | SPO2287 | SPO2285 | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | DNA-binding protein, putative; Identified by match to protein family HMM PF01381. | 0.439 |
| SPO2287 | SPO2341 | SPO2287 | SPO2341 | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | Methyltransferase, FkbM family; Identified by match to protein family HMM TIGR01444. | 0.422 |
| SPO2287 | SPO3816 | SPO2287 | SPO3816 | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | CAAX amino terminal protease family protein; Identified by match to protein family HMM PF02517. | 0.489 |
| SPO2287 | luxR-1 | SPO2287 | SPO0371 | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | Autoinducer-binding transcriptional regulator LuxR; Identified by match to protein family HMM PF00196; match to protein family HMM PF03472. | 0.843 |
| SPO2287 | luxR-2 | SPO2287 | SPO2286 | Autoinducer synthesis protein; Identified by match to protein family HMM PF00765. | Autoinducer-binding transcriptional regulator LuxR; Identified by match to protein family HMM PF00196; match to protein family HMM PF03472. | 0.908 |
| SPO2341 | SPO1866 | SPO2341 | SPO1866 | Methyltransferase, FkbM family; Identified by match to protein family HMM TIGR01444. | Hypothetical protein; Identified by Glimmer2; putative. | 0.511 |
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