Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SPO0019 | SPO2405 | SPO0019 | SPO2405 | Membrane protein, putative. | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | 0.408 |
| SPO0071 | SPO2405 | SPO0071 | SPO2405 | Competence protein F, putative; Identified by similarity to GB:AAK22815.1. | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | 0.464 |
| SPO0071 | apt | SPO0071 | SPO3066 | Competence protein F, putative; Identified by similarity to GB:AAK22815.1. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.741 |
| SPO2405 | SPO0019 | SPO2405 | SPO0019 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | Membrane protein, putative. | 0.408 |
| SPO2405 | SPO0071 | SPO2405 | SPO0071 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | Competence protein F, putative; Identified by similarity to GB:AAK22815.1. | 0.464 |
| SPO2405 | apt | SPO2405 | SPO3066 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.446 |
| SPO2405 | polA | SPO2405 | SPO3844 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.442 |
| SPO2405 | topA | SPO2405 | SPO3079 | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.425 |
| apt | SPO0071 | SPO3066 | SPO0071 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Competence protein F, putative; Identified by similarity to GB:AAK22815.1. | 0.741 |
| apt | SPO2405 | SPO3066 | SPO2405 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | 0.446 |
| apt | polA | SPO3066 | SPO3844 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.554 |
| polA | SPO2405 | SPO3844 | SPO2405 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | 0.442 |
| polA | apt | SPO3844 | SPO3066 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.554 |
| polA | topA | SPO3844 | SPO3079 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.926 |
| topA | SPO2405 | SPO3079 | SPO2405 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589. | 0.425 |
| topA | polA | SPO3079 | SPO3844 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.926 |