Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| SPO0825 | SPO1021 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM TIGR01409. | 0.900 |
| SPO0825 | SPO1552 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | ABC transporter, periplasmic substrate-binding protein, putative. | 0.904 |
| SPO0825 | SPO1830 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid binding protein; Identified by similarity to SP:P21175; match to protein family HMM PF01094. | 0.904 |
| SPO0825 | SPO1846 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | 0.920 |
| SPO0825 | SPO1939 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | 0.904 |
| SPO0825 | SPO2530 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | Branched-chain amino acid ABC transporter, permease protein; Identified by similarity to SP:P22729; match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.448 |
| SPO0825 | SPO2531 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | Branched-chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.440 |
| SPO0825 | SPO2534 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | Assignment partly based on membership in an branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094; match to protein family HMM TIGR01409. | 0.918 |
| SPO0825 | SPO3705 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein; Identified by similarity to GB:AAP25826.1; match to protein family HMM PF01094. | 0.900 |
| SPO1021 | SPO0825 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM TIGR01409. | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | 0.900 |
| SPO1021 | SPO1552 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM TIGR01409. | ABC transporter, periplasmic substrate-binding protein, putative. | 0.900 |
| SPO1021 | SPO1830 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM TIGR01409. | Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid binding protein; Identified by similarity to SP:P21175; match to protein family HMM PF01094. | 0.900 |
| SPO1021 | SPO1846 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM TIGR01409. | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | 0.900 |
| SPO1021 | SPO1939 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM TIGR01409. | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | 0.912 |
| SPO1021 | SPO2534 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM TIGR01409. | Assignment partly based on membership in an branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094; match to protein family HMM TIGR01409. | 0.900 |
| SPO1021 | SPO3705 | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM TIGR01409. | Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein; Identified by similarity to GB:AAP25826.1; match to protein family HMM PF01094. | 0.900 |
| SPO1552 | SPO0825 | ABC transporter, periplasmic substrate-binding protein, putative. | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | 0.904 |
| SPO1552 | SPO1021 | ABC transporter, periplasmic substrate-binding protein, putative. | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM TIGR01409. | 0.900 |
| SPO1552 | SPO1830 | ABC transporter, periplasmic substrate-binding protein, putative. | Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid binding protein; Identified by similarity to SP:P21175; match to protein family HMM PF01094. | 0.912 |
| SPO1552 | SPO1846 | ABC transporter, periplasmic substrate-binding protein, putative. | Assignment partly based on membership in branched-chain amino acid ABC transporter gene cluster; identified by match to protein family HMM PF01094. | 0.900 |
page 1 of 5