Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SPO1777 | aat | SPO1777 | SPO1009 | Identified by match to protein family HMM PF00037; match to protein family HMM PF01180; match to protein family HMM TIGR01037. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.457 |
| SPO1777 | ate | SPO1777 | SPO2569 | Identified by match to protein family HMM PF00037; match to protein family HMM PF01180; match to protein family HMM TIGR01037. | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.412 |
| SPO2056 | ate | SPO2056 | SPO2569 | Thiamine-phosphate pyrophosphorylase, putative; Identified by similarity to SP:P39594. | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.404 |
| SPO2567 | SPO2568 | SPO2567 | SPO2568 | Hypothetical protein; Identified by similarity to GB:CAE26557.1. | RDD family protein; Identified by match to protein family HMM PF06271. | 0.875 |
| SPO2567 | SPO2570 | SPO2567 | SPO2570 | Hypothetical protein; Identified by similarity to GB:CAE26557.1. | Identified by match to protein family HMM PF00903. | 0.515 |
| SPO2567 | ate | SPO2567 | SPO2569 | Hypothetical protein; Identified by similarity to GB:CAE26557.1. | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.692 |
| SPO2568 | SPO2567 | SPO2568 | SPO2567 | RDD family protein; Identified by match to protein family HMM PF06271. | Hypothetical protein; Identified by similarity to GB:CAE26557.1. | 0.875 |
| SPO2568 | SPO2570 | SPO2568 | SPO2570 | RDD family protein; Identified by match to protein family HMM PF06271. | Identified by match to protein family HMM PF00903. | 0.670 |
| SPO2568 | ate | SPO2568 | SPO2569 | RDD family protein; Identified by match to protein family HMM PF06271. | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.831 |
| SPO2570 | SPO2567 | SPO2570 | SPO2567 | Identified by match to protein family HMM PF00903. | Hypothetical protein; Identified by similarity to GB:CAE26557.1. | 0.515 |
| SPO2570 | SPO2568 | SPO2570 | SPO2568 | Identified by match to protein family HMM PF00903. | RDD family protein; Identified by match to protein family HMM PF06271. | 0.670 |
| SPO2570 | ate | SPO2570 | SPO2569 | Identified by match to protein family HMM PF00903. | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.789 |
| SPO3732 | ate | SPO3732 | SPO2569 | Hypothetical protein; Identified by similarity to GB:CAC46070.1; match to protein family HMM PF04339. | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.626 |
| SPO3732 | clpS | SPO3732 | SPO3656 | Hypothetical protein; Identified by similarity to GB:CAC46070.1; match to protein family HMM PF04339. | ATP-dependent Clp protease, adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.449 |
| aat | SPO1777 | SPO1009 | SPO1777 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Identified by match to protein family HMM PF00037; match to protein family HMM PF01180; match to protein family HMM TIGR01037. | 0.457 |
| aat | ate | SPO1009 | SPO2569 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.668 |
| aat | clpS | SPO1009 | SPO3656 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ATP-dependent Clp protease, adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.812 |
| ate | SPO1777 | SPO2569 | SPO1777 | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Identified by match to protein family HMM PF00037; match to protein family HMM PF01180; match to protein family HMM TIGR01037. | 0.412 |
| ate | SPO2056 | SPO2569 | SPO2056 | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Thiamine-phosphate pyrophosphorylase, putative; Identified by similarity to SP:P39594. | 0.404 |
| ate | SPO2567 | SPO2569 | SPO2567 | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Hypothetical protein; Identified by similarity to GB:CAE26557.1. | 0.692 |
page 1 of 2