Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SPO2633 | SPO2634 | SPO2633 | SPO2634 | Hypothetical protein; Identified by similarity to GB:CAE29655.1. | Sulfite reductase, putative; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460. | 0.844 |
| SPO2633 | cobA-1 | SPO2633 | SPO2632 | Hypothetical protein; Identified by similarity to GB:CAE29655.1. | uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; Belongs to the precorrin methyltransferase family. | 0.849 |
| SPO2633 | cysH | SPO2633 | SPO2635 | Hypothetical protein; Identified by similarity to GB:CAE29655.1. | Phosophoadenylyl-sulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.846 |
| SPO2634 | SPO2633 | SPO2634 | SPO2633 | Sulfite reductase, putative; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460. | Hypothetical protein; Identified by similarity to GB:CAE29655.1. | 0.844 |
| SPO2634 | cobA-1 | SPO2634 | SPO2632 | Sulfite reductase, putative; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460. | uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; Belongs to the precorrin methyltransferase family. | 0.937 |
| SPO2634 | cobA-2 | SPO2634 | SPO2873 | Sulfite reductase, putative; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460. | uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; Belongs to the precorrin methyltransferase family. | 0.846 |
| SPO2634 | cysH | SPO2634 | SPO2635 | Sulfite reductase, putative; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460. | Phosophoadenylyl-sulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.999 |
| SPO2634 | sat | SPO2634 | SPO0900 | Sulfite reductase, putative; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460. | Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate. | 0.942 |
| SPO3853 | cobA-1 | SPO3853 | SPO2632 | uroporphyrinogen-III synthase, putative; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; Belongs to the precorrin methyltransferase family. | 0.925 |
| SPO3853 | cobA-2 | SPO3853 | SPO2873 | uroporphyrinogen-III synthase, putative; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; Belongs to the precorrin methyltransferase family. | 0.925 |
| SPO3853 | hemB | SPO3853 | SPO2076 | uroporphyrinogen-III synthase, putative; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Porphobilinogen synthase; Identified by similarity to SP:Q59643; match to protein family HMM PF00490; Belongs to the ALAD family. | 0.904 |
| SPO3853 | hemC | SPO3853 | SPO3649 | uroporphyrinogen-III synthase, putative; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.992 |
| SPO3853 | hemE | SPO3853 | SPO3648 | uroporphyrinogen-III synthase, putative; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.948 |
| SPO3853 | sat | SPO3853 | SPO0900 | uroporphyrinogen-III synthase, putative; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate. | 0.479 |
| cobA-1 | SPO2633 | SPO2632 | SPO2633 | uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; Belongs to the precorrin methyltransferase family. | Hypothetical protein; Identified by similarity to GB:CAE29655.1. | 0.849 |
| cobA-1 | SPO2634 | SPO2632 | SPO2634 | uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; Belongs to the precorrin methyltransferase family. | Sulfite reductase, putative; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460. | 0.937 |
| cobA-1 | SPO3853 | SPO2632 | SPO3853 | uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; Belongs to the precorrin methyltransferase family. | uroporphyrinogen-III synthase, putative; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.925 |
| cobA-1 | cobA-2 | SPO2632 | SPO2873 | uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; Belongs to the precorrin methyltransferase family. | uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; Belongs to the precorrin methyltransferase family. | 0.909 |
| cobA-1 | cobI | SPO2632 | SPO2866 | uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; Belongs to the precorrin methyltransferase family. | Precorrin-2 C20-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01467; Belongs to the precorrin methyltransferase family. | 0.915 |
| cobA-1 | cysH | SPO2632 | SPO2635 | uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; Belongs to the precorrin methyltransferase family. | Phosophoadenylyl-sulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.963 |
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