Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SPO2679 | pcm-2 | SPO2679 | SPO2687 | Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.412 |
| SPO2679 | surE | SPO2679 | SPO2688 | Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106. | Acid phosphatase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.418 |
| SPO2686 | pcm-2 | SPO2686 | SPO2687 | LysM domain/M23/M37 peptidase; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.782 |
| SPO2686 | surE | SPO2686 | SPO2688 | LysM domain/M23/M37 peptidase; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551. | Acid phosphatase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.810 |
| SPO2689 | SPO2690 | SPO2689 | SPO2690 | Iron ABC transporter, ATP-binding protein, putative; Identified by similarity to SP:P21410; match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | Hypothetical protein; Identified by similarity to GB:CAB61860.1. | 0.550 |
| SPO2689 | pcm-2 | SPO2689 | SPO2687 | Iron ABC transporter, ATP-binding protein, putative; Identified by similarity to SP:P21410; match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.439 |
| SPO2689 | surE | SPO2689 | SPO2688 | Iron ABC transporter, ATP-binding protein, putative; Identified by similarity to SP:P21410; match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | Acid phosphatase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.441 |
| SPO2690 | SPO2689 | SPO2690 | SPO2689 | Hypothetical protein; Identified by similarity to GB:CAB61860.1. | Iron ABC transporter, ATP-binding protein, putative; Identified by similarity to SP:P21410; match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | 0.550 |
| SPO2690 | pcm-2 | SPO2690 | SPO2687 | Hypothetical protein; Identified by similarity to GB:CAB61860.1. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.431 |
| gltB | pcm-2 | SPO3768 | SPO2687 | Glutamate synthase, large subunit; Identified by similarity to SP:Q05755; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04897; match to protein family HMM PF04898. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.436 |
| ispE | pcm-2 | SPO0318 | SPO2687 | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.578 |
| mltG | pcm-2 | SPO2270 | SPO2687 | Putative protein TIGR00247; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.680 |
| pcm-2 | SPO2679 | SPO2687 | SPO2679 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106. | 0.412 |
| pcm-2 | SPO2686 | SPO2687 | SPO2686 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | LysM domain/M23/M37 peptidase; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551. | 0.782 |
| pcm-2 | SPO2689 | SPO2687 | SPO2689 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Iron ABC transporter, ATP-binding protein, putative; Identified by similarity to SP:P21410; match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | 0.439 |
| pcm-2 | SPO2690 | SPO2687 | SPO2690 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Hypothetical protein; Identified by similarity to GB:CAB61860.1. | 0.431 |
| pcm-2 | gltB | SPO2687 | SPO3768 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Glutamate synthase, large subunit; Identified by similarity to SP:Q05755; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04897; match to protein family HMM PF04898. | 0.436 |
| pcm-2 | ispE | SPO2687 | SPO0318 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.578 |
| pcm-2 | mltG | SPO2687 | SPO2270 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Putative protein TIGR00247; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.680 |
| pcm-2 | surE | SPO2687 | SPO2688 | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Acid phosphatase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.966 |
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