SPO2835 protein (Ruegeria pomeroyi) - STRING interaction network

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SPO2835

Assignment partly based on membership in dipeptide ABC transporter gene cluster; identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409. (522 aa)

Predicted Functional Partners:

SPO2833

0.926

SPO2834

0.925

SPO2831

0.894

SPO2832

0.885

SPO2836

0.835

SPO2829

0.819

SPO2830

0.687

SPO2552

0.629

SPO1645

0.605

SPO2324

0.596

Your Current Organism:

Ruegeria pomeroyi

NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
SPO1645	SPO2552	Oligopeptide/dipeptide ABC transporter, permease protein; Identified by similarity to SP:P37315; match to protein family HMM PF00528.	Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.	0.431
SPO1645	SPO2831	Oligopeptide/dipeptide ABC transporter, permease protein; Identified by similarity to SP:P37315; match to protein family HMM PF00528.	Oligopeptide ABC transporter, ATP-binding protein; Identified by similarity to SP:P42065; match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.938
SPO1645	SPO2832	Oligopeptide/dipeptide ABC transporter, permease protein; Identified by similarity to SP:P37315; match to protein family HMM PF00528.	Dipeptide ABC transporter, ATP-binding protein; Identified by similarity to SP:P24136; similarity to SP:P26905; match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.922
SPO1645	SPO2834	Oligopeptide/dipeptide ABC transporter, permease protein; Identified by similarity to SP:P37315; match to protein family HMM PF00528.	Dipeptide ABC trasnporter, permease protein; Assignment partly based on membership in dipeptide ABC transporter gene cluster; identified by similarity to SP:P37316; match to protein family HMM PF00528.	0.865
SPO1645	SPO2835	Oligopeptide/dipeptide ABC transporter, permease protein; Identified by similarity to SP:P37315; match to protein family HMM PF00528.	Assignment partly based on membership in dipeptide ABC transporter gene cluster; identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409.	0.605
SPO2324	SPO2835	Hypothetical protein; Identified by similarity to GB:BAB50081.1.	Assignment partly based on membership in dipeptide ABC transporter gene cluster; identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409.	0.596
SPO2552	SPO1645	Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.	Oligopeptide/dipeptide ABC transporter, permease protein; Identified by similarity to SP:P37315; match to protein family HMM PF00528.	0.431
SPO2552	SPO2831	Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.	Oligopeptide ABC transporter, ATP-binding protein; Identified by similarity to SP:P42065; match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.432
SPO2552	SPO2832	Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.	Dipeptide ABC transporter, ATP-binding protein; Identified by similarity to SP:P24136; similarity to SP:P26905; match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.431
SPO2552	SPO2833	Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.	Dipeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.431
SPO2552	SPO2834	Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.	Dipeptide ABC trasnporter, permease protein; Assignment partly based on membership in dipeptide ABC transporter gene cluster; identified by similarity to SP:P37316; match to protein family HMM PF00528.	0.875
SPO2552	SPO2835	Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.	Assignment partly based on membership in dipeptide ABC transporter gene cluster; identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409.	0.629
SPO2829	SPO2830	Dipeptidase domain protein; Identified by similarity to SP:O85304; match to protein family HMM PF03577.	Hypothetical protein; Identified by similarity to GB:AAN53028.1.	0.773
SPO2829	SPO2831	Dipeptidase domain protein; Identified by similarity to SP:O85304; match to protein family HMM PF03577.	Oligopeptide ABC transporter, ATP-binding protein; Identified by similarity to SP:P42065; match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.809
SPO2829	SPO2832	Dipeptidase domain protein; Identified by similarity to SP:O85304; match to protein family HMM PF03577.	Dipeptide ABC transporter, ATP-binding protein; Identified by similarity to SP:P24136; similarity to SP:P26905; match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.814
SPO2829	SPO2833	Dipeptidase domain protein; Identified by similarity to SP:O85304; match to protein family HMM PF03577.	Dipeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.823
SPO2829	SPO2834	Dipeptidase domain protein; Identified by similarity to SP:O85304; match to protein family HMM PF03577.	Dipeptide ABC trasnporter, permease protein; Assignment partly based on membership in dipeptide ABC transporter gene cluster; identified by similarity to SP:P37316; match to protein family HMM PF00528.	0.835
SPO2829	SPO2835	Dipeptidase domain protein; Identified by similarity to SP:O85304; match to protein family HMM PF03577.	Assignment partly based on membership in dipeptide ABC transporter gene cluster; identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409.	0.819
SPO2829	SPO2836	Dipeptidase domain protein; Identified by similarity to SP:O85304; match to protein family HMM PF03577.	DNA-binding protein, putative; Identified by match to protein family HMM PF01381.	0.750
SPO2830	SPO2829	Hypothetical protein; Identified by similarity to GB:AAN53028.1.	Dipeptidase domain protein; Identified by similarity to SP:O85304; match to protein family HMM PF03577.	0.773

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