SPO2840 protein (Ruegeria pomeroyi) - STRING interaction network

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gene neighborhood

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Score

SPO2840

GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254. (249 aa)

Predicted Functional Partners:

SPO0327

0.959

SPO3037

0.951

phoB

0.928

SPO0022

0.878

SPO0533

0.863

SPO3038

0.863

SPO0094

0.763

SPO0132

0.736

SPO0163

0.710

prfB

0.682

Your Current Organism:

Ruegeria pomeroyi

NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPO0022	SPO0094	SPO0022	SPO0094	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228.	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.792
SPO0022	SPO0132	SPO0022	SPO0132	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228.	Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.664
SPO0022	SPO0163	SPO0022	SPO0163	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.760
SPO0022	SPO0327	SPO0022	SPO0327	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228.	EAL domain protein; Identified by match to protein family HMM PF00563.	0.446
SPO0022	SPO0533	SPO0022	SPO0533	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228.	Diguanylate cyclase, putative.	0.878
SPO0022	SPO2840	SPO0022	SPO2840	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.878
SPO0022	SPO3038	SPO0022	SPO3038	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228.	Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.945
SPO0094	SPO0022	SPO0094	SPO0022	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228.	0.792
SPO0094	SPO0132	SPO0094	SPO0132	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.981
SPO0094	SPO0163	SPO0094	SPO0163	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.975
SPO0094	SPO0327	SPO0094	SPO0327	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	EAL domain protein; Identified by match to protein family HMM PF00563.	0.734
SPO0094	SPO0533	SPO0094	SPO0533	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Diguanylate cyclase, putative.	0.976
SPO0094	SPO2840	SPO0094	SPO2840	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.763
SPO0094	SPO3037	SPO0094	SPO3037	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	DNA-binding response regulator, LysR family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.	0.994
SPO0094	SPO3038	SPO0094	SPO3038	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.977
SPO0094	phoB	SPO0094	SPO1953	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Phosphate regulon transcriptional regulatory protein PhoB; Identified by similarity to SP:P08402; match to protein family HMM PF00072; match to protein family HMM PF00486.	0.935
SPO0094	prfB	SPO0094	SPO2585	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	0.472
SPO0132	SPO0022	SPO0132	SPO0022	Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228.	0.664
SPO0132	SPO0094	SPO0132	SPO0094	Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Sensory box sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.981
SPO0132	SPO0163	SPO0132	SPO0163	Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.981

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