SPO3048 protein (Ruegeria pomeroyi) - STRING interaction network

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SPO3048

Dipeptide ABC transporter, permease protein; Assignment partly based on membership in dipeptide ABC transporter gene cluster; identified by match to protein family HMM PF00528. (379 aa)

Predicted Functional Partners:

SPO3047

0.966

SPO3046

0.962

SPO3049

0.953

SPO2552

0.863

SPO1656

0.859

SPO1659

0.834

SPO1657

0.781

naaB-2

0.738

SPO1212

0.731

SPO1441

0.703

Your Current Organism:

Ruegeria pomeroyi

NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPO1212	SPO1656	SPO1212	SPO1656	Oligopeptide ABC transporter, permease protein; Identified by similarity to SP:P42063; match to protein family HMM PF00528.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.639
SPO1212	SPO2552	SPO1212	SPO2552	Oligopeptide ABC transporter, permease protein; Identified by similarity to SP:P42063; match to protein family HMM PF00528.	Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.	0.431
SPO1212	SPO3046	SPO1212	SPO3046	Oligopeptide ABC transporter, permease protein; Identified by similarity to SP:P42063; match to protein family HMM PF00528.	Oligopeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.688
SPO1212	SPO3048	SPO1212	SPO3048	Oligopeptide ABC transporter, permease protein; Identified by similarity to SP:P42063; match to protein family HMM PF00528.	Dipeptide ABC transporter, permease protein; Assignment partly based on membership in dipeptide ABC transporter gene cluster; identified by match to protein family HMM PF00528.	0.731
SPO1441	SPO1656	SPO1441	SPO1656	Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.685
SPO1441	SPO1657	SPO1441	SPO1657	Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.	Oligopeptide/dipeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.747
SPO1441	SPO1659	SPO1441	SPO1659	Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.	Oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409.	0.619
SPO1441	SPO3046	SPO1441	SPO3046	Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.	Oligopeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.685
SPO1441	SPO3047	SPO1441	SPO3047	Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.	Dipeptide ABC transporter, permease protein; Identified by similarity to SP:P37315; match to protein family HMM PF00528.	0.720
SPO1441	SPO3048	SPO1441	SPO3048	Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.	Dipeptide ABC transporter, permease protein; Assignment partly based on membership in dipeptide ABC transporter gene cluster; identified by match to protein family HMM PF00528.	0.703
SPO1441	SPO3049	SPO1441	SPO3049	Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.	Assignment partly based on membership in dipeptide ABC transporter gene cluster; identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409.	0.546
SPO1656	SPO1212	SPO1656	SPO1212	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	Oligopeptide ABC transporter, permease protein; Identified by similarity to SP:P42063; match to protein family HMM PF00528.	0.639
SPO1656	SPO1441	SPO1656	SPO1441	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	Fatty acid desaturase family protein; Identified by match to protein family HMM PF00487.	0.685
SPO1656	SPO1657	SPO1656	SPO1657	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	Oligopeptide/dipeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.947
SPO1656	SPO1659	SPO1656	SPO1659	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	Oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409.	0.894
SPO1656	SPO2552	SPO1656	SPO2552	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM TIGR01727; Belongs to the binding-protein-dependent transport system permease family.	0.691
SPO1656	SPO3047	SPO1656	SPO3047	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter, permease protein; Identified by similarity to SP:P37315; match to protein family HMM PF00528.	0.859
SPO1656	SPO3048	SPO1656	SPO3048	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	Dipeptide ABC transporter, permease protein; Assignment partly based on membership in dipeptide ABC transporter gene cluster; identified by match to protein family HMM PF00528.	0.859
SPO1656	SPO3049	SPO1656	SPO3049	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	Assignment partly based on membership in dipeptide ABC transporter gene cluster; identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409.	0.802
SPO1656	naaB-2	SPO1656	SPO0662	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	N-acetyltaurine ABC transporter, permease protein; Identified by similarity to SP:P42063; PMID: 21757489.	0.784

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