node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SPO1174 | prmA | SPO1174 | SPO3120 | DNA helicase II, putative; Identified by match to protein family HMM PF00580. | Ribosomal protein L11 methyltransferase, putative; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.703 |
SPO1174 | radA | SPO1174 | SPO2674 | DNA helicase II, putative; Identified by match to protein family HMM PF00580. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.736 |
SPO2850 | SPO3629 | SPO2850 | SPO3629 | DnaJ domain protein; Identified by match to protein family HMM PF00226. | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.450 |
SPO2850 | prmA | SPO2850 | SPO3120 | DnaJ domain protein; Identified by match to protein family HMM PF00226. | Ribosomal protein L11 methyltransferase, putative; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.756 |
SPO2850 | rplK | SPO2850 | SPO3514 | DnaJ domain protein; Identified by match to protein family HMM PF00226. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.769 |
SPO3119 | SPO3121 | SPO3119 | SPO3121 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF01554. | 0.545 |
SPO3119 | SPO3122 | SPO3119 | SPO3122 | Hypothetical protein; Identified by Glimmer2; putative. | Membrane protein, putative; Identified by similarity to GB:BAC62827.1. | 0.670 |
SPO3119 | prmA | SPO3119 | SPO3120 | Hypothetical protein; Identified by Glimmer2; putative. | Ribosomal protein L11 methyltransferase, putative; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.724 |
SPO3121 | SPO3119 | SPO3121 | SPO3119 | Identified by match to protein family HMM PF01554. | Hypothetical protein; Identified by Glimmer2; putative. | 0.545 |
SPO3121 | SPO3122 | SPO3121 | SPO3122 | Identified by match to protein family HMM PF01554. | Membrane protein, putative; Identified by similarity to GB:BAC62827.1. | 0.856 |
SPO3121 | prmA | SPO3121 | SPO3120 | Identified by match to protein family HMM PF01554. | Ribosomal protein L11 methyltransferase, putative; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.782 |
SPO3122 | SPO3119 | SPO3122 | SPO3119 | Membrane protein, putative; Identified by similarity to GB:BAC62827.1. | Hypothetical protein; Identified by Glimmer2; putative. | 0.670 |
SPO3122 | SPO3121 | SPO3122 | SPO3121 | Membrane protein, putative; Identified by similarity to GB:BAC62827.1. | Identified by match to protein family HMM PF01554. | 0.856 |
SPO3122 | prmA | SPO3122 | SPO3120 | Membrane protein, putative; Identified by similarity to GB:BAC62827.1. | Ribosomal protein L11 methyltransferase, putative; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.861 |
SPO3629 | SPO2850 | SPO3629 | SPO2850 | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | DnaJ domain protein; Identified by match to protein family HMM PF00226. | 0.450 |
SPO3629 | dnaJ | SPO3629 | SPO0044 | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.458 |
SPO3629 | prmA | SPO3629 | SPO3120 | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Ribosomal protein L11 methyltransferase, putative; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.811 |
dnaJ | SPO3629 | SPO0044 | SPO3629 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.458 |
dnaJ | prmA | SPO0044 | SPO3120 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Ribosomal protein L11 methyltransferase, putative; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.689 |
dnaJ | rplK | SPO0044 | SPO3514 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.769 |