STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPO3173Cation transport protein ChaC, putative; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. (177 aa)    
Predicted Functional Partners:
SPO1343
Identified by match to protein family HMM PF00043; match to protein family HMM PF02798.
  
  
  0.923
SPO2902
Identified by match to protein family HMM PF00043; match to protein family HMM PF02798.
  
  
  0.920
SPO3764
Identified by match to protein family HMM PF02798.
  
  
 0.918
SPO3208
Identified by match to protein family HMM PF00043.
  
  
  0.917
gshB
Glutathione synthetase; Identified by similarity to SP:P04425; match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.
    
 0.908
SPO0403
Hypothetical protein; Identified by similarity to GB:CAD13614.1.
     
 0.904
SPO1257
Identified by match to protein family HMM PF02798; Belongs to the GST superfamily.
     
 0.904
SPO2163
Hypothetical protein; Identified by similarity to PIR:AC3193.
     
 0.904
SPO2917
Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.
     
 0.904
SPO3435
Identified by match to protein family HMM PF00043; match to protein family HMM PF02798.
     
 0.904
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.