STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
SPO3173Cation transport protein ChaC, putative; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family. (177 aa)    
Predicted Functional Partners:
SPO1343
Identified by match to protein family HMM PF00043; match to protein family HMM PF02798.
  
  
  0.923
SPO2902
Identified by match to protein family HMM PF00043; match to protein family HMM PF02798.
  
  
  0.920
SPO3208
Identified by match to protein family HMM PF00043.
  
  
  0.917
SPO3764
Identified by match to protein family HMM PF02798.
  
  
  0.915
gshB
Glutathione synthetase; Identified by similarity to SP:P04425; match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.
    
 0.909
pepN
Identified by similarity to SP:P37893; match to protein family HMM PF01433.
    
 0.904
gor
Glutathione-disulfide reductase; Maintains high levels of reduced glutathione.
     
 0.903
ggt
Gamma-glutamyltranspeptidase; Identified by similarity to SP:P54422.
   
 
 0.901
SPO0866
Gamma-glutamyltranspeptidase, putative; Identified by match to protein family HMM PF01019.
   
 
 0.901
SPO3411
Gamma-glutamyltranspeptidase, putative; Identified by match to protein family HMM PF01019.
   
 
 0.901
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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