STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPO3322Hypothetical protein; Identified by similarity to GB:CAC46971.1. (449 aa)    
Predicted Functional Partners:
SPO3321
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.962
SPO3323
Hypothetical protein; Identified by similarity to GB:CAC46974.1.
     0.951
SPO3320
Hypothetical protein; Identified by similarity to GB:AAO54466.1.
 
     0.889
SPO3324
Hypothetical protein; Identified by similarity to GB:CAC46975.1.
 
     0.866
SPO3325
Hypothetical protein; Identified by similarity to GB:BAB49806.1.
 
     0.862
SPO2307
Hypothetical protein; Identified by similarity to GB:BAB49208.1.
  
     0.524
SPO3858
Hypothetical protein; Identified by similarity to GB:BAB50937.1.
  
     0.473
SPO0300
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.454
SPO1277
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.419
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.