SPO3417 protein (Ruegeria pomeroyi) - STRING interaction network

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Score

SPO3417

Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155. (393 aa)

Predicted Functional Partners:

SPO3416

0.894

SPO3415

0.840

murC

0.768

SPO3418

0.689

SPO3419

0.563

hom

0.548

gltB

0.523

lysA

0.475

dapD

0.471

hisS

0.463

Your Current Organism:

Ruegeria pomeroyi

NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPO3415	SPO3416	SPO3415	SPO3416	Outer membrane lipoprotein carrier protein LolA, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	Identified by match to protein family HMM PF01580.	0.873
SPO3415	SPO3417	SPO3415	SPO3417	Outer membrane lipoprotein carrier protein LolA, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	0.840
SPO3415	SPO3418	SPO3415	SPO3418	Outer membrane lipoprotein carrier protein LolA, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	Identified by match to protein family HMM PF01425; Belongs to the amidase family.	0.534
SPO3415	SPO3419	SPO3415	SPO3419	Outer membrane lipoprotein carrier protein LolA, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; Identified by match to protein family HMM PF01360; match to protein family HMM TIGR01988.	0.597
SPO3415	hisS	SPO3415	SPO0667	Outer membrane lipoprotein carrier protein LolA, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	histidyl-tRNA synthetase.	0.400
SPO3416	SPO3415	SPO3416	SPO3415	Identified by match to protein family HMM PF01580.	Outer membrane lipoprotein carrier protein LolA, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	0.873
SPO3416	SPO3417	SPO3416	SPO3417	Identified by match to protein family HMM PF01580.	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	0.894
SPO3416	SPO3418	SPO3416	SPO3418	Identified by match to protein family HMM PF01580.	Identified by match to protein family HMM PF01425; Belongs to the amidase family.	0.709
SPO3416	SPO3419	SPO3416	SPO3419	Identified by match to protein family HMM PF01580.	Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; Identified by match to protein family HMM PF01360; match to protein family HMM TIGR01988.	0.570
SPO3416	murC	SPO3416	SPO1196	Identified by match to protein family HMM PF01580.	UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.	0.423
SPO3417	SPO3415	SPO3417	SPO3415	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	Outer membrane lipoprotein carrier protein LolA, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	0.840
SPO3417	SPO3416	SPO3417	SPO3416	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	Identified by match to protein family HMM PF01580.	0.894
SPO3417	SPO3418	SPO3417	SPO3418	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	Identified by match to protein family HMM PF01425; Belongs to the amidase family.	0.689
SPO3417	SPO3419	SPO3417	SPO3419	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; Identified by match to protein family HMM PF01360; match to protein family HMM TIGR01988.	0.563
SPO3417	dapD	SPO3417	SPO3337	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Identified by similarity to SP:P03948; match to protein family HMM PF00132; match to protein family HMM TIGR00965; Belongs to the transferase hexapeptide repeat family.	0.471
SPO3417	gltB	SPO3417	SPO3768	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	Glutamate synthase, large subunit; Identified by similarity to SP:Q05755; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04897; match to protein family HMM PF04898.	0.523
SPO3417	hisS	SPO3417	SPO0667	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	histidyl-tRNA synthetase.	0.463
SPO3417	hom	SPO3417	SPO1734	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	Homoserine dehydrogenase; Identified by similarity to SP:P08499; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447.	0.548
SPO3417	lysA	SPO3417	SPO0334	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.	0.475
SPO3417	murC	SPO3417	SPO1196	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.	0.768

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