SPO3417 protein (Ruegeria pomeroyi) - STRING interaction network

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Score

SPO3417

Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155. (393 aa)

Predicted Functional Partners:

SPO3416

0.908

SPO3415

0.859

murC

0.777

SPO3418

0.735

SPO3419

0.636

hom

0.547

gltB

0.502

gltA

0.493

dapD

0.492

dapE

0.471

Your Current Organism:

Ruegeria pomeroyi

NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPO3415	SPO3416	SPO3415	SPO3416	Outer membrane lipoprotein carrier protein LolA, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	Identified by match to protein family HMM PF01580.	0.888
SPO3415	SPO3417	SPO3415	SPO3417	Outer membrane lipoprotein carrier protein LolA, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	0.859
SPO3415	SPO3418	SPO3415	SPO3418	Outer membrane lipoprotein carrier protein LolA, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	Identified by match to protein family HMM PF01425; Belongs to the amidase family.	0.529
SPO3415	SPO3419	SPO3415	SPO3419	Outer membrane lipoprotein carrier protein LolA, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; Identified by match to protein family HMM PF01360; match to protein family HMM TIGR01988.	0.614
SPO3416	SPO3415	SPO3416	SPO3415	Identified by match to protein family HMM PF01580.	Outer membrane lipoprotein carrier protein LolA, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	0.888
SPO3416	SPO3417	SPO3416	SPO3417	Identified by match to protein family HMM PF01580.	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	0.908
SPO3416	SPO3418	SPO3416	SPO3418	Identified by match to protein family HMM PF01580.	Identified by match to protein family HMM PF01425; Belongs to the amidase family.	0.746
SPO3416	SPO3419	SPO3416	SPO3419	Identified by match to protein family HMM PF01580.	Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; Identified by match to protein family HMM PF01360; match to protein family HMM TIGR01988.	0.627
SPO3416	murC	SPO3416	SPO1196	Identified by match to protein family HMM PF01580.	UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.	0.489
SPO3417	SPO3415	SPO3417	SPO3415	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	Outer membrane lipoprotein carrier protein LolA, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	0.859
SPO3417	SPO3416	SPO3417	SPO3416	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	Identified by match to protein family HMM PF01580.	0.908
SPO3417	SPO3418	SPO3417	SPO3418	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	Identified by match to protein family HMM PF01425; Belongs to the amidase family.	0.735
SPO3417	SPO3419	SPO3417	SPO3419	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; Identified by match to protein family HMM PF01360; match to protein family HMM TIGR01988.	0.636
SPO3417	dapD	SPO3417	SPO3337	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Identified by similarity to SP:P03948; match to protein family HMM PF00132; match to protein family HMM TIGR00965; Belongs to the transferase hexapeptide repeat family.	0.492
SPO3417	dapE	SPO3417	SPO3332	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.	0.471
SPO3417	gltA	SPO3417	SPO2157	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	Citrate synthase I; Identified by similarity to SP:P00891; match to protein family HMM PF00285; match to protein family HMM TIGR01798; Belongs to the citrate synthase family.	0.493
SPO3417	gltB	SPO3417	SPO3768	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	Glutamate synthase, large subunit; Identified by similarity to SP:Q05755; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04897; match to protein family HMM PF04898.	0.502
SPO3417	hom	SPO3417	SPO1734	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	Homoserine dehydrogenase; Identified by similarity to SP:P08499; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447.	0.547
SPO3417	murC	SPO3417	SPO1196	Aminotransferase, classes I and II; Identified by match to protein family HMM PF00155.	UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.	0.777
SPO3418	SPO3415	SPO3418	SPO3415	Identified by match to protein family HMM PF01425; Belongs to the amidase family.	Outer membrane lipoprotein carrier protein LolA, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	0.529

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