STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPO3441Hypothetical protein; Identified by similarity to GB:AAC02256.1. (508 aa)    
Predicted Functional Partners:
SPO3442
PmbA; Identified by similarity to SP:P24231.
       0.748
SPO3443
Identified by similarity to SP:P22783; match to protein family HMM PF00459.
       0.748
SPO3439
Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.722
SPO2776
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.693
SPO3263
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.690
SPO1032
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.689
SPO3811
Hypothetical protein; Identified by similarity to GB:AAK25396.1.
 
     0.678
SPO2148
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.665
trgA
Tellurite resistance protein; Identified by similarity to GB:AAB95446.1.
  
     0.662
SPO1198
Hypothetical protein; Identified by similarity to GB:BAC67841.1.
  
     0.657
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.