STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
SPO3462Flagellar hook-length control protein; Identified by match to protein family HMM PF02120. (825 aa)    
Predicted Functional Partners:
flgD
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.989
SPO3461
Flagellar protein FlgJ, putative; Identified by similarity to SP:P75942.
 
  
 0.985
SPO1026
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.929
flgB
Flagellar basal-body rod protein; Identified by similarity to SP:P24500; similarity to SP:P75934.
 
  
 0.923
fliE
Flagellar hook-basal body complex protein FliE, putative; Identified by similarity to SP:P24502.
 
  
 0.916
fliG
Flagellar motor switch protein FliG; Identified by similarity to SP:P23448; match to protein family HMM PF01706.
 
  
 0.903
fliL
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.899
SPO0202
Hypothetical protein; Identified by similarity to PIR:E83956.
 
  
 0.890
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.881
SPO0198
ABC transporter, ATP-binding protein, flagellar, putative.
 
  
 0.881
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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