SPO3494 protein (Ruegeria pomeroyi) - STRING interaction network

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SPO3494

Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily. (233 aa)

Predicted Functional Partners:

SPO0563

0.679

rimM

0.675

SPO3573

0.519

SPO3829

0.468

mscL

0.435

rpoA

0.421

rpoB

0.407

Your Current Organism:

Ruegeria pomeroyi

NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPO0563	SPO3494	SPO0563	SPO3494	Glutathione S-transferase, putative; Identified by similarity to SP:Q12390.	Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.	0.679
SPO0563	rpoA	SPO0563	SPO0511	Glutathione S-transferase, putative; Identified by similarity to SP:Q12390.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.421
SPO0563	rpoB	SPO0563	SPO3508	Glutathione S-transferase, putative; Identified by similarity to SP:Q12390.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.407
SPO3494	SPO0563	SPO3494	SPO0563	Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.	Glutathione S-transferase, putative; Identified by similarity to SP:Q12390.	0.679
SPO3494	SPO3573	SPO3494	SPO3573	Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.	NADPH-dependent FMN reductase domain protein; Identified by match to protein family HMM PF03358.	0.519
SPO3494	SPO3829	SPO3494	SPO3829	Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.	S-formylglutathione hydrolase, putative; Serine hydrolase involved in the detoxification of formaldehyde.	0.468
SPO3494	mscL	SPO3494	SPO3495	Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.	Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.	0.435
SPO3494	rimM	SPO3494	SPO3255	Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.	16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	0.675
SPO3494	rpoA	SPO3494	SPO0511	Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.421
SPO3494	rpoB	SPO3494	SPO3508	Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.407
SPO3573	SPO3494	SPO3573	SPO3494	NADPH-dependent FMN reductase domain protein; Identified by match to protein family HMM PF03358.	Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.	0.519
SPO3829	SPO3494	SPO3829	SPO3494	S-formylglutathione hydrolase, putative; Serine hydrolase involved in the detoxification of formaldehyde.	Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.	0.468
mscL	SPO3494	SPO3495	SPO3494	Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.	Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.	0.435
rimM	SPO3494	SPO3255	SPO3494	16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.	0.675
rimM	rpoA	SPO3255	SPO0511	16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.874
rimM	rpoB	SPO3255	SPO3508	16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.881
rpoA	SPO0563	SPO0511	SPO0563	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Glutathione S-transferase, putative; Identified by similarity to SP:Q12390.	0.421
rpoA	SPO3494	SPO0511	SPO3494	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Identified by match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.	0.421
rpoA	rimM	SPO0511	SPO3255	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.	0.874
rpoA	rpoB	SPO0511	SPO3508	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997

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