Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SPO0098 | SPO2066 | SPO0098 | SPO2066 | Peptide/opine/nickel uptake family ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. | 0.542 |
| SPO0098 | yejA | SPO0098 | SPO3537 | Peptide/opine/nickel uptake family ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | Oligopeptide/dipeptide uptake family ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. | 0.522 |
| SPO0098 | yejB | SPO0098 | SPO3536 | Peptide/opine/nickel uptake family ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | Oligopeptide/dipeptide uptake family ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.692 |
| SPO0098 | yejE | SPO0098 | SPO3535 | Peptide/opine/nickel uptake family ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | Oligopeptide/dipeptide uptake family ABC transporter, permease protein; Identified by similarity to SP:P33915; match to protein family HMM PF00528. | 0.727 |
| SPO0561 | SPO2066 | SPO0561 | SPO2066 | ABC transporter; 'initially identified as a pseudogene, expression verified by proteomics'; Belongs to the ABC transporter superfamily. | ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. | 0.526 |
| SPO0561 | naaB | SPO0561 | SPO0661 | ABC transporter; 'initially identified as a pseudogene, expression verified by proteomics'; Belongs to the ABC transporter superfamily. | N-acetyltaurine ABC transporter, permease protein; Identified by similarity to SP:P42062; PMID: 21757489. | 0.432 |
| SPO0561 | yejA | SPO0561 | SPO3537 | ABC transporter; 'initially identified as a pseudogene, expression verified by proteomics'; Belongs to the ABC transporter superfamily. | Oligopeptide/dipeptide uptake family ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. | 0.537 |
| SPO0561 | yejB | SPO0561 | SPO3536 | ABC transporter; 'initially identified as a pseudogene, expression verified by proteomics'; Belongs to the ABC transporter superfamily. | Oligopeptide/dipeptide uptake family ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.524 |
| SPO0561 | yejE | SPO0561 | SPO3535 | ABC transporter; 'initially identified as a pseudogene, expression verified by proteomics'; Belongs to the ABC transporter superfamily. | Oligopeptide/dipeptide uptake family ABC transporter, permease protein; Identified by similarity to SP:P33915; match to protein family HMM PF00528. | 0.649 |
| SPO1213 | SPO2066 | SPO1213 | SPO2066 | Oligopeptide ABC transporter, ATP-binding protein; Substrate assignment partly based on location in oligopeptide ABC transporter gene cluster; identified by similarity to SP:P75796; match to protein family HMM PF00005. | ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. | 0.497 |
| SPO1213 | naaB | SPO1213 | SPO0661 | Oligopeptide ABC transporter, ATP-binding protein; Substrate assignment partly based on location in oligopeptide ABC transporter gene cluster; identified by similarity to SP:P75796; match to protein family HMM PF00005. | N-acetyltaurine ABC transporter, permease protein; Identified by similarity to SP:P42062; PMID: 21757489. | 0.426 |
| SPO1213 | yejA | SPO1213 | SPO3537 | Oligopeptide ABC transporter, ATP-binding protein; Substrate assignment partly based on location in oligopeptide ABC transporter gene cluster; identified by similarity to SP:P75796; match to protein family HMM PF00005. | Oligopeptide/dipeptide uptake family ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. | 0.474 |
| SPO1213 | yejB | SPO1213 | SPO3536 | Oligopeptide ABC transporter, ATP-binding protein; Substrate assignment partly based on location in oligopeptide ABC transporter gene cluster; identified by similarity to SP:P75796; match to protein family HMM PF00005. | Oligopeptide/dipeptide uptake family ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.428 |
| SPO1213 | yejE | SPO1213 | SPO3535 | Oligopeptide ABC transporter, ATP-binding protein; Substrate assignment partly based on location in oligopeptide ABC transporter gene cluster; identified by similarity to SP:P75796; match to protein family HMM PF00005. | Oligopeptide/dipeptide uptake family ABC transporter, permease protein; Identified by similarity to SP:P33915; match to protein family HMM PF00528. | 0.596 |
| SPO2066 | SPO0098 | SPO2066 | SPO0098 | ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. | Peptide/opine/nickel uptake family ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | 0.542 |
| SPO2066 | SPO0561 | SPO2066 | SPO0561 | ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. | ABC transporter; 'initially identified as a pseudogene, expression verified by proteomics'; Belongs to the ABC transporter superfamily. | 0.526 |
| SPO2066 | SPO1213 | SPO2066 | SPO1213 | ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. | Oligopeptide ABC transporter, ATP-binding protein; Substrate assignment partly based on location in oligopeptide ABC transporter gene cluster; identified by similarity to SP:P75796; match to protein family HMM PF00005. | 0.497 |
| SPO2066 | naaB | SPO2066 | SPO0661 | ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. | N-acetyltaurine ABC transporter, permease protein; Identified by similarity to SP:P42062; PMID: 21757489. | 0.438 |
| SPO2066 | yejA | SPO2066 | SPO3537 | ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. | Oligopeptide/dipeptide uptake family ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. | 0.456 |
| SPO2066 | yejB | SPO2066 | SPO3536 | ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. | Oligopeptide/dipeptide uptake family ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.872 |
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