Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SPO1590 | SPO1591 | SPO1590 | SPO1591 | Rieske 2Fe-2S domain protein; Identified by match to protein family HMM PF00355. | SIS domain protein; Identified by match to protein family HMM PF01380. | 0.937 |
| SPO1590 | catB | SPO1590 | SPO3667 | Rieske 2Fe-2S domain protein; Identified by match to protein family HMM PF00355. | Muconate cycloisomerase I; Identified by similarity to PIR:T48870; match to protein family HMM PF01188; match to protein family HMM PF02746; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.591 |
| SPO1591 | SPO1590 | SPO1591 | SPO1590 | SIS domain protein; Identified by match to protein family HMM PF01380. | Rieske 2Fe-2S domain protein; Identified by match to protein family HMM PF00355. | 0.937 |
| SPO1591 | catB | SPO1591 | SPO3667 | SIS domain protein; Identified by match to protein family HMM PF01380. | Muconate cycloisomerase I; Identified by similarity to PIR:T48870; match to protein family HMM PF01188; match to protein family HMM PF02746; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.508 |
| SPO3662 | SPO3663 | SPO3662 | SPO3663 | Membrane protein, putative. | TRAP dicarboxylate family transporter, DctM subunit; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786. | 0.830 |
| SPO3662 | SPO3664 | SPO3662 | SPO3664 | Membrane protein, putative. | Hypothetical protein. | 0.922 |
| SPO3662 | SPO3665 | SPO3662 | SPO3665 | Membrane protein, putative. | Bacterial extracellular solute-binding protein, family 7; Identified by match to protein family HMM PF03480. | 0.845 |
| SPO3662 | SPO3666 | SPO3662 | SPO3666 | Membrane protein, putative. | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266. | 0.649 |
| SPO3662 | SPO3668 | SPO3662 | SPO3668 | Membrane protein, putative. | Transcriptional regulator, LysR family; Identified by similarity to SP:P03030; match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.554 |
| SPO3662 | catB | SPO3662 | SPO3667 | Membrane protein, putative. | Muconate cycloisomerase I; Identified by similarity to PIR:T48870; match to protein family HMM PF01188; match to protein family HMM PF02746; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.459 |
| SPO3663 | SPO3662 | SPO3663 | SPO3662 | TRAP dicarboxylate family transporter, DctM subunit; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786. | Membrane protein, putative. | 0.830 |
| SPO3663 | SPO3664 | SPO3663 | SPO3664 | TRAP dicarboxylate family transporter, DctM subunit; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786. | Hypothetical protein. | 0.980 |
| SPO3663 | SPO3665 | SPO3663 | SPO3665 | TRAP dicarboxylate family transporter, DctM subunit; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786. | Bacterial extracellular solute-binding protein, family 7; Identified by match to protein family HMM PF03480. | 0.907 |
| SPO3663 | SPO3666 | SPO3663 | SPO3666 | TRAP dicarboxylate family transporter, DctM subunit; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786. | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266. | 0.633 |
| SPO3663 | SPO3668 | SPO3663 | SPO3668 | TRAP dicarboxylate family transporter, DctM subunit; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786. | Transcriptional regulator, LysR family; Identified by similarity to SP:P03030; match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.418 |
| SPO3663 | catB | SPO3663 | SPO3667 | TRAP dicarboxylate family transporter, DctM subunit; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786. | Muconate cycloisomerase I; Identified by similarity to PIR:T48870; match to protein family HMM PF01188; match to protein family HMM PF02746; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.563 |
| SPO3664 | SPO3662 | SPO3664 | SPO3662 | Hypothetical protein. | Membrane protein, putative. | 0.922 |
| SPO3664 | SPO3663 | SPO3664 | SPO3663 | Hypothetical protein. | TRAP dicarboxylate family transporter, DctM subunit; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786. | 0.980 |
| SPO3664 | SPO3665 | SPO3664 | SPO3665 | Hypothetical protein. | Bacterial extracellular solute-binding protein, family 7; Identified by match to protein family HMM PF03480. | 0.916 |
| SPO3664 | SPO3666 | SPO3664 | SPO3666 | Hypothetical protein. | Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266. | 0.770 |
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