Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SPO1721 | SPO3695 | SPO1721 | SPO3695 | TRAP dicarboxylate transporter, DctP subunit, putative; Identified by match to protein family HMM PF03480; match to protein family HMM TIGR00787. | TRAP dicarboxylate transporter, DctM subunit, putative; Identified by match to protein family HMM PF06808. | 0.475 |
| SPO2433 | SPO3695 | SPO2433 | SPO3695 | TRAP dicarboxylate transporter, DctP subunit, putative; Identified by match to protein family HMM PF03480. | TRAP dicarboxylate transporter, DctM subunit, putative; Identified by match to protein family HMM PF06808. | 0.472 |
| SPO2545 | SPO3695 | SPO2545 | SPO3695 | TRAP dicarboxylate transporter, DctP subunit, putative; Identified by similarity to SP:P37735; match to protein family HMM PF03480. | TRAP dicarboxylate transporter, DctM subunit, putative; Identified by match to protein family HMM PF06808. | 0.723 |
| SPO2545 | hpsL | SPO2545 | SPO0592 | TRAP dicarboxylate transporter, DctP subunit, putative; Identified by similarity to SP:P37735; match to protein family HMM PF03480. | Dihydroxypropanesulfonate (DHPS) TRAP transporter; PMID: 20150239. | 0.419 |
| SPO3691 | SPO3692 | SPO3691 | SPO3692 | Identified by match to protein family HMM PF01557. | Monooxygenase, putative; Identified by match to protein family HMM PF01360. | 0.799 |
| SPO3691 | SPO3693 | SPO3691 | SPO3693 | Identified by match to protein family HMM PF01557. | TRAP dicarboxylate transporter, DctP subunit; Identified by similarity to SP:P37735; match to protein family HMM PF03480. | 0.648 |
| SPO3691 | SPO3694 | SPO3691 | SPO3694 | Identified by match to protein family HMM PF01557. | Hypothetical protein; Identified by similarity to GB:AAK03610.1. | 0.494 |
| SPO3691 | SPO3695 | SPO3691 | SPO3695 | Identified by match to protein family HMM PF01557. | TRAP dicarboxylate transporter, DctM subunit, putative; Identified by match to protein family HMM PF06808. | 0.480 |
| SPO3691 | gtdA-1 | SPO3691 | SPO3690 | Identified by match to protein family HMM PF01557. | Gentisate 1,2-dioxygenase; Identified by similarity to GB:CAA12267.1. | 0.868 |
| SPO3692 | SPO3691 | SPO3692 | SPO3691 | Monooxygenase, putative; Identified by match to protein family HMM PF01360. | Identified by match to protein family HMM PF01557. | 0.799 |
| SPO3692 | SPO3693 | SPO3692 | SPO3693 | Monooxygenase, putative; Identified by match to protein family HMM PF01360. | TRAP dicarboxylate transporter, DctP subunit; Identified by similarity to SP:P37735; match to protein family HMM PF03480. | 0.648 |
| SPO3692 | SPO3694 | SPO3692 | SPO3694 | Monooxygenase, putative; Identified by match to protein family HMM PF01360. | Hypothetical protein; Identified by similarity to GB:AAK03610.1. | 0.482 |
| SPO3692 | SPO3695 | SPO3692 | SPO3695 | Monooxygenase, putative; Identified by match to protein family HMM PF01360. | TRAP dicarboxylate transporter, DctM subunit, putative; Identified by match to protein family HMM PF06808. | 0.517 |
| SPO3692 | fcs | SPO3692 | SPO3696 | Monooxygenase, putative; Identified by match to protein family HMM PF01360. | feruloyl-CoA synthetase; Identified by similarity to GB:CAB60226.1; match to protein family HMM PF00501. | 0.492 |
| SPO3692 | gtdA-1 | SPO3692 | SPO3690 | Monooxygenase, putative; Identified by match to protein family HMM PF01360. | Gentisate 1,2-dioxygenase; Identified by similarity to GB:CAA12267.1. | 0.952 |
| SPO3693 | SPO3691 | SPO3693 | SPO3691 | TRAP dicarboxylate transporter, DctP subunit; Identified by similarity to SP:P37735; match to protein family HMM PF03480. | Identified by match to protein family HMM PF01557. | 0.648 |
| SPO3693 | SPO3692 | SPO3693 | SPO3692 | TRAP dicarboxylate transporter, DctP subunit; Identified by similarity to SP:P37735; match to protein family HMM PF03480. | Monooxygenase, putative; Identified by match to protein family HMM PF01360. | 0.648 |
| SPO3693 | SPO3694 | SPO3693 | SPO3694 | TRAP dicarboxylate transporter, DctP subunit; Identified by similarity to SP:P37735; match to protein family HMM PF03480. | Hypothetical protein; Identified by similarity to GB:AAK03610.1. | 0.919 |
| SPO3693 | SPO3695 | SPO3693 | SPO3695 | TRAP dicarboxylate transporter, DctP subunit; Identified by similarity to SP:P37735; match to protein family HMM PF03480. | TRAP dicarboxylate transporter, DctM subunit, putative; Identified by match to protein family HMM PF06808. | 0.910 |
| SPO3693 | fcs | SPO3693 | SPO3696 | TRAP dicarboxylate transporter, DctP subunit; Identified by similarity to SP:P37735; match to protein family HMM PF03480. | feruloyl-CoA synthetase; Identified by similarity to GB:CAB60226.1; match to protein family HMM PF00501. | 0.580 |
page 1 of 3