STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
SPO3736Antioxidant, AhpC/Tsa family; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (161 aa)    
Predicted Functional Partners:
SPO3742
Glutathione peroxidase famly protein; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.
   
 0.932
SPO2902
Identified by match to protein family HMM PF00043; match to protein family HMM PF02798.
 
 
  0.927
gor
Glutathione-disulfide reductase; Maintains high levels of reduced glutathione.
 
  
 0.926
SPO3261
Identified by match to protein family HMM PF00043; match to protein family HMM PF02798.
  
 
  0.916
SPO3208
Identified by match to protein family HMM PF00043.
  
 
  0.915
SPO2163
Hypothetical protein; Identified by similarity to PIR:AC3193.
  
 
  0.914
gshB
Glutathione synthetase; Identified by similarity to SP:P04425; match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.
     
 0.907
SPO0403
Hypothetical protein; Identified by similarity to GB:CAD13614.1.
   
 
  0.902
gst
Glutathione S-transferase; Identified by similarity to SP:P39100; match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.
   
 
  0.902
SPO1257
Identified by match to protein family HMM PF02798; Belongs to the GST superfamily.
  
 
  0.902
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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