STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPO3742Glutathione peroxidase famly protein; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family. (173 aa)    
Predicted Functional Partners:
gor
Glutathione-disulfide reductase; Maintains high levels of reduced glutathione.
  
 0.944
gshB
Glutathione synthetase; Identified by similarity to SP:P04425; match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.
    
 0.938
SPO3736
Antioxidant, AhpC/Tsa family; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.932
SPO0403
Hypothetical protein; Identified by similarity to GB:CAD13614.1.
  
 
 0.914
SPO1343
Identified by match to protein family HMM PF00043; match to protein family HMM PF02798.
   
 
 0.913
SPO1257
Identified by match to protein family HMM PF02798; Belongs to the GST superfamily.
   
 
 0.912
SPO2163
Hypothetical protein; Identified by similarity to PIR:AC3193.
   
 
 0.912
SPO3435
Identified by match to protein family HMM PF00043; match to protein family HMM PF02798.
   
 
 0.912
SPO3764
Identified by match to protein family HMM PF02798.
  
 
 0.911
ggt
Gamma-glutamyltranspeptidase; Identified by similarity to SP:P54422.
    
 0.910
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.