STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPO3794Hypothetical protein; Identified by similarity to GB:AAM35022.1. (50 aa)    
Predicted Functional Partners:
acoX
Acetoin catabolism protein X; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
 
     0.572
acoR
Acetoin catabolism regulatory protein; Identified by similarity to SP:P28614; match to protein family HMM PF00158; match to protein family HMM PF01590.
 
     0.561
acoC
Acetoin dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase; Identified by similarity to SP:Q59695; match to protein family HMM PF00364; match to protein family HMM PF00561.
 
     0.515
acoA
Acetoin dehydrogenase complex, E1 component, alpha subunit; Identified by similarity to PIR:I40790; match to protein family HMM PF00676.
       0.475
acoB
Acetoin dehydrogenase complex, E1 component, beta subunit; Identified by similarity to SP:O34591; match to protein family HMM PF02779; match to protein family HMM PF02780.
       0.424
SPO3126
Sigma factor regulator PrtR, putative; Identified by similarity to GB:AAF81073.1.
  
     0.406
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.