Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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co-expression
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SPO3873ATP-dependent DNA helicase, UvrD/Rep family; Identified by match to protein family HMM PF00580; Belongs to the helicase family. UvrD subfamily. (1118 aa)    
Predicted Functional Partners:
SPO3872
Hypothetical protein; Identified by similarity to GB:AAM48721.1.
   
 0.973
SPO0373
Helicase, ATP-dependent, putative.
  
 
 0.922
SPO3870
Hypothetical protein; Identified by similarity to GB:AAM48719.1.
 
     0.862
SPO3871
Identified by match to protein family HMM PF00483.
 
     0.857
SPO3869
Putative protein TIGR00150; Identified by similarity to GB:AAK25496.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150.
     
 0.853
recO
DNA repair protein RecO, putative; Involved in DNA repair and RecF pathway recombination.
 
   
 0.816
SPO1174
DNA helicase II, putative; Identified by match to protein family HMM PF00580.
 
  
0.779
SPO3868
Hypothetical protein; Identified by similarity to GB:AAM48718.1.
       0.744
trx
Thioredoxin; Identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family.
       0.715
SPO1117
Phosphatase, Ppx/GppA family; Identified by match to protein family HMM PF02541.
  
     0.673
Your Current Organism:
Ruegeria pomeroyi
NCBI taxonomy Id: 246200
Other names: R. pomeroyi DSS-3, Ruegeria pomeroyi DSS-3, Ruegeria pomeroyi str. DSS-3, Ruegeria pomeroyi strain DSS-3, Silicibacter pomeroyi DSS-3
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