Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
virB3Type IV secretion system protein VirB3. (98 aa)    
Predicted Functional Partners:
virB4-2
Type IV secretion system protein VirB4.
 
 
 0.999
virB6-4
Type IV secretory pathway VirB6 components.
 
 
 0.996
virB8
Type IV secretory pathway component VirB8.
 
 
 0.994
virB6
Type IV secretory pathway VirB6 components.
 
 
 0.993
virB10
Type IV secretory pathway VirB10 component.
 
 
 0.992
virB6-2
Type IV secretory pathway VirB6 components.
 
 
 0.987
virB6-3
Type IV secretory pathway VirB6 components.
 
 
 0.984
virB4
Type IV secretion system protein VirB4.
 
 
 0.983
virB9
Type IV secretory pathway component VirB9.
 
  
 0.943
virB9-2
Putative virB9 protein.
 
  
 0.942
Your Current Organism:
Wolbachia endosymbiont of Cimex
NCBI taxonomy Id: 246273
Other names: W. endosymbiont of Cimex lectularius, Wolbachia endosymbiont of Cimex lectularius
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