STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507D2A3Uncharacterized protein. (525 aa)    
Predicted Functional Partners:
A0A507FMN3
Uncharacterized protein.
    
  0.775
A0A507FLM2
Uncharacterized protein.
    
  0.624
A0A507FPR2
Sm domain-containing protein.
    
  0.618
A0A507FVK1
CaMKII_AD domain-containing protein.
    
  0.610
A0A507FJI1
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
  0.601
A0A507FDR6
Uncharacterized protein.
    
 0.593
A0A507FNZ3
Small nuclear ribonucleoprotein Sm D2.
    
 0.583
A0A507DJJ1
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.574
A0A507EVU8
SER_THR_PHOSPHATASE domain-containing protein.
    
  0.574
A0A507EXC9
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.574
Your Current Organism:
Chytriomyces confervae
NCBI taxonomy Id: 246404
Other names: C. confervae, Chytridium confervae, Chytridium confervae (Wille) Minden, Chytriomyces confervae A.Batko
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