STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507DRM5Xpo1 domain-containing protein. (344 aa)    
Predicted Functional Partners:
A0A507FGS5
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 
 0.915
A0A507EXL1
RRM domain-containing protein.
    
 
 0.888
A0A507FIN1
S1-like domain-containing protein.
    
 
 0.856
A0A507FE45
ATP-grasp domain-containing protein.
   
 0.852
A0A507F3R0
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 
 0.832
A0A507FJQ8
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 
 0.832
A0A507D986
Uncharacterized protein.
    
 
 0.820
A0A507E318
Uncharacterized protein.
    
 
 0.820
A0A507FG91
Formyl_trans_N domain-containing protein.
   
 0.804
A0A507FGV3
Formyl_trans_N domain-containing protein.
   
 0.804
Your Current Organism:
Chytriomyces confervae
NCBI taxonomy Id: 246404
Other names: C. confervae, Chytridium confervae, Chytridium confervae (Wille) Minden, Chytriomyces confervae A.Batko
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