STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507F1W960S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (170 aa)    
Predicted Functional Partners:
A0A507DYI9
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 0.997
A0A507E210
Uncharacterized protein.
  
 0.997
A0A507FDX6
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.997
A0A507FGR0
Uncharacterized protein.
  
 0.997
A0A507FJ12
Uncharacterized protein.
   
 0.997
A0A507FM04
Ribos_L4_asso_C domain-containing protein.
  
 0.997
A0A507FNQ6
Uncharacterized protein.
  
 0.997
A0A507FPY0
Uncharacterized protein.
  
 0.997
A0A507F5W8
Uncharacterized protein.
  
 0.996
A0A507FNY9
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 0.996
Your Current Organism:
Chytriomyces confervae
NCBI taxonomy Id: 246404
Other names: C. confervae, Chytridium confervae, Chytridium confervae (Wille) Minden, Chytriomyces confervae A.Batko
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