A0A507FAQ2 protein (Chytriomyces confervae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A507FAQ2

PAPS_reduct domain-containing protein. (272 aa)

Predicted Functional Partners:

A0A507FMW6

0.939

MET14

0.917

MET14-2

0.917

MET3

0.909

A0A507DIJ0

0.881

A0A507F001

0.881

FMN1

0.881

A0A507DQK5

0.861

A0A507DZN1

0.861

A0A507FFS9

0.839

Your Current Organism:

Chytriomyces confervae

NCBI taxonomy Id: 246404
Other names: C. confervae, Chytridium confervae, Chytridium confervae (Wille) Minden, Chytriomyces confervae A.Batko

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A507DIJ0	A0A507FAQ2	A0A507DIJ0	A0A507FAQ2	Uncharacterized protein.	PAPS_reduct domain-containing protein.	0.881
A0A507DIJ0	A0A507FMW6	A0A507DIJ0	A0A507FMW6	Uncharacterized protein.	MoCF_biosynth domain-containing protein.	0.829
A0A507DQK5	A0A507FAQ2	A0A507DQK5	A0A507FAQ2	Flavodoxin-like domain-containing protein.	PAPS_reduct domain-containing protein.	0.861
A0A507DQK5	A0A507FFS9	A0A507DQK5	A0A507FFS9	Flavodoxin-like domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein.	0.936
A0A507DQK5	A0A507FMW6	A0A507DQK5	A0A507FMW6	Flavodoxin-like domain-containing protein.	MoCF_biosynth domain-containing protein.	0.861
A0A507DQK5	MET14	A0A507DQK5	A0A507FA42	Flavodoxin-like domain-containing protein.	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	0.926
A0A507DQK5	MET14-2	A0A507DQK5	A0A507FKH9	Flavodoxin-like domain-containing protein.	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	0.926
A0A507DQK5	MET3	A0A507DQK5	A0A507EKT2	Flavodoxin-like domain-containing protein.	Sulfate adenylyltransferase; Catalyzes the first intracellular reaction of sulfate assimilation, forming adenosine-5'-phosphosulfate (APS) from inorganic sulfate and ATP. Plays an important role in sulfate activation as a component of the biosynthesis pathway of sulfur-containing amino acids. In the N-terminal section; belongs to the sulfate adenylyltransferase family.	0.954
A0A507DZN1	A0A507FAQ2	A0A507DZN1	A0A507FAQ2	Flavodoxin-like domain-containing protein.	PAPS_reduct domain-containing protein.	0.861
A0A507DZN1	A0A507FFS9	A0A507DZN1	A0A507FFS9	Flavodoxin-like domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein.	0.936
A0A507DZN1	A0A507FMW6	A0A507DZN1	A0A507FMW6	Flavodoxin-like domain-containing protein.	MoCF_biosynth domain-containing protein.	0.861
A0A507DZN1	MET14	A0A507DZN1	A0A507FA42	Flavodoxin-like domain-containing protein.	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	0.926
A0A507DZN1	MET14-2	A0A507DZN1	A0A507FKH9	Flavodoxin-like domain-containing protein.	Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.	0.926
A0A507DZN1	MET3	A0A507DZN1	A0A507EKT2	Flavodoxin-like domain-containing protein.	Sulfate adenylyltransferase; Catalyzes the first intracellular reaction of sulfate assimilation, forming adenosine-5'-phosphosulfate (APS) from inorganic sulfate and ATP. Plays an important role in sulfate activation as a component of the biosynthesis pathway of sulfur-containing amino acids. In the N-terminal section; belongs to the sulfate adenylyltransferase family.	0.954
A0A507F001	A0A507FAQ2	A0A507F001	A0A507FAQ2	Uncharacterized protein.	PAPS_reduct domain-containing protein.	0.881
A0A507F001	A0A507FMW6	A0A507F001	A0A507FMW6	Uncharacterized protein.	MoCF_biosynth domain-containing protein.	0.829
A0A507FAQ2	A0A507DIJ0	A0A507FAQ2	A0A507DIJ0	PAPS_reduct domain-containing protein.	Uncharacterized protein.	0.881
A0A507FAQ2	A0A507DQK5	A0A507FAQ2	A0A507DQK5	PAPS_reduct domain-containing protein.	Flavodoxin-like domain-containing protein.	0.861
A0A507FAQ2	A0A507DZN1	A0A507FAQ2	A0A507DZN1	PAPS_reduct domain-containing protein.	Flavodoxin-like domain-containing protein.	0.861
A0A507FAQ2	A0A507F001	A0A507FAQ2	A0A507F001	PAPS_reduct domain-containing protein.	Uncharacterized protein.	0.881