STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507FCW0Uncharacterized protein. (638 aa)    
Predicted Functional Partners:
A0A507FMT1
Uncharacterized protein.
   
 0.998
A0A507F5Q7
Uncharacterized protein.
    
 0.832
A0A507FCN7
MPN domain-containing protein.
    
 0.803
A0A507FDX6
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.795
A0A507FNH1
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.781
A0A507FQN4
ERCC4 domain-containing protein.
   
 0.759
A0A507ENV8
ERCC4 domain-containing protein.
   
 0.745
A0A507EM35
Uncharacterized protein.
   
 0.694
A0A507F4S3
Uncharacterized protein.
   
 0.694
A0A507FD37
Uncharacterized protein.
   
 0.694
Your Current Organism:
Chytriomyces confervae
NCBI taxonomy Id: 246404
Other names: C. confervae, Chytridium confervae, Chytridium confervae (Wille) Minden, Chytriomyces confervae A.Batko
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