STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507FDE2Uncharacterized protein. (424 aa)    
Predicted Functional Partners:
A0A507EVR5
Uncharacterized protein.
    
 0.839
A0A507FM49
DNA ligase.
   
 0.823
A0A507FNE2
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.757
A0A507FCL8
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.743
MED20
Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.735
A0A507FDR6
Uncharacterized protein.
    
 0.733
CCO718
Long-chain-alcohol O-fatty-acyltransferase.
    
  0.732
A0A507EYE8
Uncharacterized protein.
    
 0.727
CDS1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
     
 0.722
A0A507F4F8
TAF domain-containing protein.
    
 0.717
Your Current Organism:
Chytriomyces confervae
NCBI taxonomy Id: 246404
Other names: C. confervae, Chytridium confervae, Chytridium confervae (Wille) Minden, Chytriomyces confervae A.Batko
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.