STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507FDI7Uncharacterized protein. (1301 aa)    
Predicted Functional Partners:
A0A507EF29
WD_REPEATS_REGION domain-containing protein.
   
 0.927
A0A507EKY6
WD_REPEATS_REGION domain-containing protein.
   
 0.927
A0A507EHX5
Amino_oxidase domain-containing protein.
    
 0.852
A0A507FQ64
Amino_oxidase domain-containing protein.
    
 0.852
A0A507D3Q4
Uncharacterized protein.
   
 0.836
A0A507DPM1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.836
A0A507F0A9
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.836
A0A507F9F2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.836
A0A507FL82
Hist_deacetyl domain-containing protein.
   
 0.836
A0A507F2Q9
Fungal_trans domain-containing protein.
   
 0.810
Your Current Organism:
Chytriomyces confervae
NCBI taxonomy Id: 246404
Other names: C. confervae, Chytridium confervae, Chytridium confervae (Wille) Minden, Chytriomyces confervae A.Batko
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