STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507FG63Uncharacterized protein. (455 aa)    
Predicted Functional Partners:
A0A507FMN3
Uncharacterized protein.
    
  0.775
A0A507FLM2
Uncharacterized protein.
    
  0.624
A0A507FPR2
Sm domain-containing protein.
    
  0.618
A0A507FJI1
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
  0.601
A0A507FDR6
Uncharacterized protein.
    
 0.593
A0A507FNZ3
Small nuclear ribonucleoprotein Sm D2.
    
 0.583
A0A507F9X1
Uncharacterized protein.
    
  0.562
A0A507EVB9
Uncharacterized protein.
    
 0.547
A0A507F671
Uncharacterized protein.
    
 0.547
A0A507FDJ2
Uncharacterized protein.
    
 0.547
Your Current Organism:
Chytriomyces confervae
NCBI taxonomy Id: 246404
Other names: C. confervae, Chytridium confervae, Chytridium confervae (Wille) Minden, Chytriomyces confervae A.Batko
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