STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507FI53Uncharacterized protein. (1681 aa)    
Predicted Functional Partners:
A0A507FMT1
Uncharacterized protein.
   
 0.995
A0A507FMV3
Uncharacterized protein.
    
  0.985
A0A507F0R9
Uncharacterized protein.
   
 0.978
A0A507FDX6
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
 0.978
A0A507D4T4
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
    
 0.966
A0A507ENH3
CIA30 domain-containing protein.
    
  0.947
A0A507FK10
Ubiquitin-like domain-containing protein.
    
  0.947
A0A507FLE8
Ubiquitin carboxyl-terminal hydrolase.
    
 0.936
A0A507FCN7
MPN domain-containing protein.
    
 0.934
A0A507FH71
NTF2 domain-containing protein.
   
 0.926
Your Current Organism:
Chytriomyces confervae
NCBI taxonomy Id: 246404
Other names: C. confervae, Chytridium confervae, Chytridium confervae (Wille) Minden, Chytriomyces confervae A.Batko
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